Gene Nham_3034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3034 
Symbol 
ID4032163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3344264 
End bp3345586 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content63% 
IMG OID637971458 
Productglycosyl transferase, group 1 
Protein accessionYP_578240 
Protein GI92118511 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGG CATCGCACAG AATGAAAATC CTCGTTTATC CGCACACCAT GGAGATCGGA 
GGATCGCAGC TCAACGCTGT CCAGTTAGCG GGTGCCGTGC GGGATCGCGG CCACGATGTC
ATCGTGATGT CCGAACCCGG GCCACTGGTT GAGCGCGTTC ACAAGATGGG GCTGCGCACC
ATTGAAATTT CACTGCACCG GCGGCGCCCA TCGCCAAAAG TCATCCAGAC GATGGTTCGG
GTGGTCCGGG ATTTGGGTGT CGACGTGGTG CACGGCTATG AATGGCCGCC GATTATCGAG
GCGTTCCTGG GCCCTGCCCT TCTTCAACAG GTCCCTGTCG TCGGCACGGT GATGTCGATG
TCGGTGGCTC CGTTCCTGCC GCGAACCGTG CCGCTGATGG TTGGGACCGA ACTGATCCGC
CGGGCTGCGC TCGAAGCGGG TCACCAGCAC GTTACCCTCC TCGAACCGCC GGTTGATGCG
GAGGCCGATA CGCCGCTGAT CGATGGCGGA GCCTTGCGCG CGAAGTACGG CATTGGGCCG
AAGCAGATCG TCATCGCGAT GATCTGCCGG CTGGTCCCCG AACTCAAGCT GGAGGGATTG
CTGGCCGCTT GCGATTCAGT TGGTGAAATG GCTCGCTCAG GCCGCGACGT ACGGCTGCTG
ATTGTCGGGG ACGGCCGGGC GCGGGAAACG GTCGCCGCCC ATGCGGCCCA AGCCAACGCC
ACCGCTGGCC GCAACACGGT GGTGATGACC GGAGAAATTC TCGATCCTGC CAGCGCCTAC
GCCGCCGCGG ACATCATCAT CGGCCAGGGT GGGTCCGCAC TCCGGGGAAT GGCCTTCGGC
AAGCCGCTTA TCGTGATCGG CGAAGACGGC TTCAGCGAAT TGCTGACACC ACAAAGCCTG
CCAACCTTTC TTCGACAGGG GTGGTACGGC CTCGGGCCGG GATCGCTTGG TGCCGGTGCA
TCCGCGCTGC GCATGGCGCT CGAGCGCCTT GCGGATTCAC CTTCGTTGCG AGGAGATCTC
GGCCAGTTCG CGCGCAATCT CGTCGTTGAA CGATTCAGCT TGCGCCAGGC GGCGGACCGC
CAGGAACAGA TGTATCTGTC CGCCCTGCAG GATACTGTTC CGGCCTTTGC GCGGCTTGCC
GACTTCGTCC GCTCCACCGC GGGGCTGACC GGCGGAAAAC TGCAACGCGG TTATCAACGC
TGGCGCGGGA CCGCCGCGAT CGACGACAGC AACGCGCGAG ACCTCATCGC CAGAATCCTC
GCAAGCCATC AAACCGCTCC AACAACAGCG TCTGCGCAGC AAGCTCCTGC CAAAAGAAAA
TAA
 
Protein sequence
MTQASHRMKI LVYPHTMEIG GSQLNAVQLA GAVRDRGHDV IVMSEPGPLV ERVHKMGLRT 
IEISLHRRRP SPKVIQTMVR VVRDLGVDVV HGYEWPPIIE AFLGPALLQQ VPVVGTVMSM
SVAPFLPRTV PLMVGTELIR RAALEAGHQH VTLLEPPVDA EADTPLIDGG ALRAKYGIGP
KQIVIAMICR LVPELKLEGL LAACDSVGEM ARSGRDVRLL IVGDGRARET VAAHAAQANA
TAGRNTVVMT GEILDPASAY AAADIIIGQG GSALRGMAFG KPLIVIGEDG FSELLTPQSL
PTFLRQGWYG LGPGSLGAGA SALRMALERL ADSPSLRGDL GQFARNLVVE RFSLRQAADR
QEQMYLSALQ DTVPAFARLA DFVRSTAGLT GGKLQRGYQR WRGTAAIDDS NARDLIARIL
ASHQTAPTTA SAQQAPAKRK