| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2923 |
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| Symbol | |
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| ID | 4031263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3212573 |
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| End bp | 3215608 |
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| Gene Length | 3036 bp |
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| Protein Length | 1011 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637971368 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_578150 |
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| Protein GI | 92118421 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.50321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAGA CTCCCGATTC CCCGAAACAA CCCGGCAAAA CGCCGAAATC CAAGGTTTCG
AAATCCAAGG TCCCGAATTC GAAGGCGCCG AAATCCAAGG CACATCGTCC CGAGGTGCAG
CCGATCGGGC CTGCGCTCGC GGAACTGCTC AATCCCGCTA TCAATCGCGG CGACGCCGGC
CTCGGTTCCG GCACGGGCTT ACAGCCGCCG CCGGACAACT CGTGGGACCG CCGCTCCGGC
GGCGAGGCGG CTGCGCATCG CGCGCGCGCC TCAACGCGCG GCAAGAGCGA GCTTACAGCC
GAGCGCGATG CTGCGCACTC CTCTCCCCCC TCTAGTGGGG AGGATGTCGG ACGCGGCTTC
GACGAAGCAC AGCAATCGGA ATTCGCGACG CCGACCTACG GCACGTCGGC CACCGTTCCG
GCGCTCGATC CGGAACTGGC GCGGCAACTC GGGCTGCCGA CCGCCGAGGA TGACGACGAG
GCATTGGCGC GGCCGCCGCG CAACAAGATG GAAGGCCTCG GCGTCAAGGC GACAGCGGAG
TCGCTGGAAG CGCTGTTGCG CGACGGCCGA CCCGAATTTC GCGGCGACAA CGGCGCGATG
AAAGTGTGGA CGCCGCACCG CCCGCCGCGC CCGGAGAAAT CCGAGGGCGG CGTGCGCTTC
GTCATCAAGT CCGAATACGA GCCGAAGGGC GATCAGCCGA CCGCGATCAA GGAACTGGTC
GAAGGCATCA ACCGCAACGA CCGCACCCAG GTGCTGCTCG GCGTCACCGG CTCCGGCAAG
ACCTACACCA TGGCCAAGGT GATCGAGGCG ACGCAGCGCC CGGCCCTGAT CCTCGCGCCG
AACAAGACGC TGGCGGCGCA GCTCTACGGC GAGTTCAAGA GCTTCTTCCC CGACAACGCG
GTGGAATATT TCGTCAGCTA CTACGATTAC TATCAGCCGG AGGCGTATGT CCCTCGCACC
GACACCTACA TCGAGAAGGA TTCCTCGATC AACGAGCAGA TTGACCGCAT GCGTCATTCG
GCGACGCGCG CGCTGCTGGA GCGCGACGAC GTCATCATCG TCGCCTCGGT GTCGTGCATT
TACGGTATCG GTTCGGTCGA GACCTACACT GCGATGACGT TCGCCTTGAG GCGCGGCGAG
CGCATCGACC AGCGCCAGCT CATCGCCGAC CTCGTGGCAC TGCAATACAA GCGCACCTCG
GCCGACTTCA CCCGCGGCAC CTTCCGCGTA CGCGGCGACG TCATCGACAT CTTCCCGGCG
CACTACGAGG ACCGGTCCTG GCGCGTCAAC CTGTTCGGCG ACGAGGTGGA AAGCATCGAG
GAGTTCGATC CCCTCACCGG CCACAAGCAG GACGAACTGG AATTCATCAA GGTCTATTCC
AATTCCCACT ATGTCACGCC GCGTCCGACG CTGATTCAGG CGATCAAGTC GATCAAGTCC
GAACTCAAGA TGCGGCTCGA CGAATTGCAC GCGCAGGGGC GACTCCTTGA AGCGCAACGG
CTGGAGCAGC GCACCACCTT CGATCTCGAA ATGATGGAGG CCACCGGAAG CTGCGCCGGC
ATCGAGAACT ATTCGCGCTA TCTCACCGGC CGCCGTCCCG GCGAGCCGCC GCCGACGCTG
TTCGAATACG TTCCCGACAA CGCGCTGGTA TTCGCCGACG AGAGCCACGT CAGCGTGCCG
CAGATCGGCG GCATGTTCCG CGGCGACTTC CGCCGCAAGG CGACGCTCGC CGAATACGGT
TTTCGCCTGC CCTCCTGCAT GGACAACCGA CCGCTGCGTT TCGAGGAATG GGACATGATG
CGCCCGCAAT CGGTCGCAGT GTCGGCAACA CCCTCGGCGT GGGAATTGAA CGAAAGCGGC
GGCGTGTTCG TCGAGCAGGT GATCCGCCCG ACCGGGCTGA TCGATCCGCC GATCGACATC
CGCCCCGCGC GCACCCAAGT GGACGATCTC GTCGGCGAGG TGCGCGCCAC CGCCGCTGCG
GGCTATCGCT CGCTCGTCAC CGTGCTGACC AAGCGCATGG CGGAGGACCT CACCGAATAT
CTGCACGAGC AGGGCATCCG CGTCCGCTAC ATGCACTCAG ACATCGACAC CATCGAGCGC
ATCGAGATCA TCCGCGATCT GAGGTTAGGT GCGTTCGACG CGTTGGTCGG CATCAACCTG
CTGCGCGAGG GCCTCGACAT TCCCGAATGC GCGCTGGTCG CCATTCTCGA CGCCGACAAG
GAAGGTTTTT TGCGCAGCGA GACCTCGCTG ATCCAGACTA TCGGCCGCGC CGCGCGCAAC
GTGGACGGCC GGGTGATCCT CTATGCCGAT CAGGTCACGG GATCGATGCA ACGCGCGATC
GCCGAGACCG ACCGCCGCCG CGAGAAGCAG GTGGAGTACA ACACCGTCCA CGGCATCACC
CCGGAGAGCA TCAAGAAATC CATCGGCGAT ATCCTCAACA GCGTCTACGA GCGCGACCAT
GTGCTGGTGG AGATCGGCGA TGGCGGCATG GCCGACGATG CGGTCGCGAT CGGCCACAAC
TTCGAGGCGG TCCTCTCCGA TCTGGAAACG CGGATGCGCG AGGCCGCCGC CGACCTGAAC
TTCGAGGAGG CCGCACGGCT GCGCGACGAG GTCAAGCGGC TGCGCGCCAC CGAGCTTGCG
GTGGTGGACG ATCCCACTAT CAAGCAGCGC GGCGTCGCGG CCAAAGCAGG CGCTTATGCT
GGCAACAAGA AGTATGGCGA CGCAGCGAAT CTGCCGGCGC GTTTGGATAA AGCGGCGCAA
GGCAGGCCGT CCGGAAAGTT TGGCAAGCGC GGCTCCTCAA CTTCAAAAAT CCACAAGCCC
TCGCTCGACG AGATGGGCAT CGCTACCTGG CACGAGGTCA AGCCGGCCGG CACGCGCCCG
AAGCCGCGCA AACCCACGCT CGACGAAATG GGTCCGGGGA CCGAAAGCAA GATTTTCCAG
CCGACCAATT CACGCGAATC CGGCCCGGAA TTCGGTCCAC GACCGCGATC ATCCGGCGGC
GCGCCGGGGC ATCGCGGCGG GTGGAAGAAG AGGTGA
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| Protein sequence | MTKTPDSPKQ PGKTPKSKVS KSKVPNSKAP KSKAHRPEVQ PIGPALAELL NPAINRGDAG
LGSGTGLQPP PDNSWDRRSG GEAAAHRARA STRGKSELTA ERDAAHSSPP SSGEDVGRGF
DEAQQSEFAT PTYGTSATVP ALDPELARQL GLPTAEDDDE ALARPPRNKM EGLGVKATAE
SLEALLRDGR PEFRGDNGAM KVWTPHRPPR PEKSEGGVRF VIKSEYEPKG DQPTAIKELV
EGINRNDRTQ VLLGVTGSGK TYTMAKVIEA TQRPALILAP NKTLAAQLYG EFKSFFPDNA
VEYFVSYYDY YQPEAYVPRT DTYIEKDSSI NEQIDRMRHS ATRALLERDD VIIVASVSCI
YGIGSVETYT AMTFALRRGE RIDQRQLIAD LVALQYKRTS ADFTRGTFRV RGDVIDIFPA
HYEDRSWRVN LFGDEVESIE EFDPLTGHKQ DELEFIKVYS NSHYVTPRPT LIQAIKSIKS
ELKMRLDELH AQGRLLEAQR LEQRTTFDLE MMEATGSCAG IENYSRYLTG RRPGEPPPTL
FEYVPDNALV FADESHVSVP QIGGMFRGDF RRKATLAEYG FRLPSCMDNR PLRFEEWDMM
RPQSVAVSAT PSAWELNESG GVFVEQVIRP TGLIDPPIDI RPARTQVDDL VGEVRATAAA
GYRSLVTVLT KRMAEDLTEY LHEQGIRVRY MHSDIDTIER IEIIRDLRLG AFDALVGINL
LREGLDIPEC ALVAILDADK EGFLRSETSL IQTIGRAARN VDGRVILYAD QVTGSMQRAI
AETDRRREKQ VEYNTVHGIT PESIKKSIGD ILNSVYERDH VLVEIGDGGM ADDAVAIGHN
FEAVLSDLET RMREAAADLN FEEAARLRDE VKRLRATELA VVDDPTIKQR GVAAKAGAYA
GNKKYGDAAN LPARLDKAAQ GRPSGKFGKR GSSTSKIHKP SLDEMGIATW HEVKPAGTRP
KPRKPTLDEM GPGTESKIFQ PTNSRESGPE FGPRPRSSGG APGHRGGWKK R
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