| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2890 |
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| Symbol | |
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| ID | 4033195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3185127 |
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| End bp | 3185603 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637971336 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_578118 |
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| Protein GI | 92118389 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.576703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAAATC TCAGCAAATG CGTTCCGTTT CTTGGTCTTG TCGTGCTGGC ATGGCCGCAG
CCCTCGTCGG CGCAGCGGGC ACAATACGAG TCGATGGTGG CGGCACACGC GCAAGCCAAC
GGCGTTCCCG TCGAACTGGT CCACCGCGTC ATCGTGCGCG AGAGCCGCTA CAACCCGCGC
GCAGTGCACC GCGGCAATTA CGGCATGATG CAGATCAAGC TCGCGACCGC GAGGGGGCTT
GGCTACACCG GCACCGCCGA AGGCCTGCTC GATCCCGAAA CCAATCTCAC CTACGCGGTC
AGGTATCTCG CCGGCGCATA CCAGGCAGCT CACGGCAACC ACGACCGCGC CGTGGCCTAT
TACGCTGGCG GCTACTATTA CGCGGCGAAA CGACAGCGGC TGCAGCGTGC CCGGCACGAA
ACCATGAGCG CCGACGCACG AATCCCCGGC GCACCGCTGT CGATCGCGCC GCGCTGA
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| Protein sequence | MTNLSKCVPF LGLVVLAWPQ PSSAQRAQYE SMVAAHAQAN GVPVELVHRV IVRESRYNPR
AVHRGNYGMM QIKLATARGL GYTGTAEGLL DPETNLTYAV RYLAGAYQAA HGNHDRAVAY
YAGGYYYAAK RQRLQRARHE TMSADARIPG APLSIAPR
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