| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2875 |
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| Symbol | carB |
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| ID | 4032889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3169384 |
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| End bp | 3172848 |
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| Gene Length | 3465 bp |
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| Protein Length | 1154 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637971321 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_578103 |
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| Protein GI | 92118374 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.712522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAAC GCACCGACAT ATCGACCATC CTCATCATCG GCGCCGGGCC GATCGTCATT
GGTCAGGCCT GCGAATTCGA CTATTCCGGC ACCCAGGCGG TGAAGGCGCT GAAGGAGGAG
GGTTACCGGG TCGTCCTGGT CAATTCCAAT CCGGCGACGA TCATGACCGA TCCCGAGCTC
GCCGACGCCA CCTATATCGA GCCGATCACC CCGGAAATCG TCGCCAGGAT CATCGAAAAG
GAACGCCACG TCATTCCCGG CGGTTTCGCA CTGCTGCCGA CCATGGGCGG CCAGACCGCG
CTGAACTGCG CCTTGTCGCT GCGCCGGCTG GGCACGCTGG AGGAGTTCGA CGTCGAGATG
ATCGGCGCCA CCGCCGACGC CATCGACAAG GCCGAGGACC GGCAACTGTT CCGCGAGGCC
ATGACCAAGA TCGGCCTCGA AACGCCTAAA TCCCGTCTCG CCAACGCCTC CGCGCTCAAG
AAATCCGATC GCGACAGCCA CCTCGCCGAG AAAGACAAGC TCTCCGGCGA CGCGCTCGCC
GAATTCGAAC GGCAATGGAC GCTCGGCGAG AACGAGCGCC GCAAGCGTTA CCAGCAGCAG
GCGATGGCGG AAGCGCTGAT GGCGCTGTCG GAGATCGGCC TGCCTGCGAT CATCCGTCCC
TCCTTCACCA TGGGCGGCAC CGGCGGCGGC ATCGCCTACA CGCGCGACGA GTTTCTCGAC
ATCATCGAGC GCGGCCTCGA CGCCTCCCCG ACCAACGAGG TCTTGATCGA AGAGAGCGTG
CTCGGCTGGA AAGAGTACGA GATGGAAGTC GTCCGCGACA AAAAGGACAA CTGCATCATC
GTCTGCTCGA TCGAGAATCT CGATCCGATG GGCGTCCACA CCGGCGACTC CATCACGGTG
GCGCCGGCGC TGACGCTGAC CGACAAGGAA TACCAGATCA TGCGCGACGC CTCGCTGGCG
GTGTTGCGGG AGATCGGCGT CGAGACCGGC GGCTCCAACG TGCAGTTCGG CGTCGATCCT
GCCGACGGCC GCATGGTCGT CATCGAAATG AATCCGCGCG TGTCGCGCTC CTCGGCACTC
GCATCAAAAG CGACGGGCTT CCCGATCGCC AAGGTCGCGG CAAAACTCGC TGTCGGCTAC
ACGCTCGACG AGATCGCCAA CGATATCACC GGCGGCGCGA CTCCGGCATC GTTCGAGCCC
AGCATCGACT ACGTCGTCAC CAAGATTCCG CGTTTCGCTT TCGAAAAATT TCCCGGCGCC
TCGACCACGC TGACCACCTC GATGAAATCG GTCGGCGAGG TGATGGCGAT CGGCCGCACC
TTTCAGGAAA GTCTCCAGAA GGCACTGCGC GGACTGGAGA TCGGCCTCAC CGGCCTCGAC
GAAATCGAGA TCGAAGGCCT GGGTCAGAGC GACGACAAGA ACGCGATCCG CGCAGCGCTC
GGCACGCCAA CCCCCGATCG CCTGCTGCAG CTCGCGCAGG CGATGCGGCT CGGCTGGAGC
GACGAGGATA TCTTCAATTC CTGCAAGATC GACCCCTGGT TCCTCGCCGA ACTGCGCGGC
ATCGTCGAGA TGGAGAACAA GGTCCGCGCC CACGGCCTGC CGGGCAACGC CTTCGGTATG
CGCACGCTCA AGGCGATGGG TTTCTCGGAC GCGCGCCTGG CGGTGCTCGC AGGCAAGACC
GAGGCGGAGG TCAAAACGCT CCGCCGTACA CTCGGCGTGC GCCCGGCCTA CAAGCGCATC
GACACCTGCG CCGCGGAATT CGCCTCACCG ACCGCGTACA TGTACTCGAC CTACGAATCG
CCGTTCGCGG GCGCGGTTGT CGACGAGAGC GCACCGTCGG ACAGGACAAA GGTCGTCATC
CTCGGCGGCG GTCCCAACCG CATCGGTCAG GGCATCGAGT TCGACTATTG CTGTTGCCAT
GCCTGCTTCG CGCTGTCGGA CGCCGGCTTT GAAACGATCA TGGTCAACTG TAATCCGGAA
ACGGTGTCGA CCGACTACGA CACCGCCGAC CGGCTCTACT TCGAGCCGCT GACGGCCGAA
GACGTGCTGG AAATCATCGA TACCGAACGG CAGAACGGAA CGCTGCACGG CGTGATCGTG
CAGTTCGGAG GCCAGACGCC GCTGAAACTT GCACGCGCGC TGGAGGCGGC CGACGTGCCG
ATCCTCGGCA CCTCGCCCGA AGCCATCGAT CTCGCGGAAG ACCGCGACCG CTTCAAGCGT
ATCCTCGACC GGCTGAAACT GAAGCAGCCG AAAAACGGCA TCGCCTATTC GGTGGAGCAG
GCGCGGCTGG TGGCGGCCGA TCTCGGCCTG CCGCTGGTGG TGCGCCCGTC CTACGTGCTG
GGCGGCCGCG CCATGCAGAT CATCCGCGAG GAAAACCAGC TCGGCGACTA CCTGCTCGGC
ACCCTGCCCG AACTCGTGCC CGCCGACGTC AAGGCGCGCT ATCCGAACGA CAAGACCGGC
CAGATCAACA CCGTGCTCGG CACCAACCCG CTGCTGTTCG ATCGCTATCT CTCCGACGCC
ACCGAAATCG ATGTCGATTG CCTCTGCGAC GGCAAGGACA CCTTCGTCGT CGGCATCATG
GAGCATATCG AGGAAGCGGG CATCCACTCC GGCGACTCGG CCTGCTCGCT GCCGCCGCGC
TCGCTCGATG CGGCCACCAT CACTGAGCTG GAGCGGCAGA CCCGCGAGCT TGCGCTCGGA
CTCGACGTCA TCGGCCTGAT GAACGTGCAA TACGCCATCA AGGACGGCGA TATCTACGTG
CTTGAAGTGA ACCCCCGCGC CTCGCGCACG GTGCCGTTCG TCGCCAAGGT GGTCGGCCTT
CCCGTCGCCA AGATCGCGGC GCGGATCATG GCCGGCGAGA AGTTGGCCTC CTTCAAGCTC
AAGCCACAGA AGCTCGGCCA TGTCGGCGTC AAGGAATCGG TCTTCCCCTT CGCGCGCTTC
CCCGGCGTCG ATACCGTGCT CGGTCCGGAA ATGAAATCGA CCGGCGAGGT GATGGGCATC
GACCGCTCGT TCGAGATCGC CTTCGCCAAG AGCCAGCTCG GCGGCGGTAC GCGTCTGCCG
CGCAAGGGCA CGGTGTTCGT CTCGGTCCGC GAAACCGACA AAATGCGCAT CCTCGAAACG
GTAAAGCTGT TGTCTTCGGT CGGCTTCAGA GTGATGGCGA CATCGGGGAC ACAACGCTAC
CTGTCCGACA GCGGCGTTCC GGCCGAGAAG ATCAACAAGG TTCTGGAGGG CCGGCCGCAT
ATCGTGGACG CCATCACCAA CGGCGAGGTG CAACTGGTAT TCAACACCAC CGATGGACCG
CAGGCACTGG CCGACAGCCG CTCGCTGCGG CGTGCTGCCC TCTTGCATAA AGTGCCGTAT
TACACCACTC TTTCGGGCGC CGTGGCGGCC GCGCAGGGCA TCCGCGCCTA TCTGGGCGGG
GACCTTGAGG TTCGCACGTT GCAGAGCTAC TTTTCCGAGA CCTAG
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| Protein sequence | MPKRTDISTI LIIGAGPIVI GQACEFDYSG TQAVKALKEE GYRVVLVNSN PATIMTDPEL
ADATYIEPIT PEIVARIIEK ERHVIPGGFA LLPTMGGQTA LNCALSLRRL GTLEEFDVEM
IGATADAIDK AEDRQLFREA MTKIGLETPK SRLANASALK KSDRDSHLAE KDKLSGDALA
EFERQWTLGE NERRKRYQQQ AMAEALMALS EIGLPAIIRP SFTMGGTGGG IAYTRDEFLD
IIERGLDASP TNEVLIEESV LGWKEYEMEV VRDKKDNCII VCSIENLDPM GVHTGDSITV
APALTLTDKE YQIMRDASLA VLREIGVETG GSNVQFGVDP ADGRMVVIEM NPRVSRSSAL
ASKATGFPIA KVAAKLAVGY TLDEIANDIT GGATPASFEP SIDYVVTKIP RFAFEKFPGA
STTLTTSMKS VGEVMAIGRT FQESLQKALR GLEIGLTGLD EIEIEGLGQS DDKNAIRAAL
GTPTPDRLLQ LAQAMRLGWS DEDIFNSCKI DPWFLAELRG IVEMENKVRA HGLPGNAFGM
RTLKAMGFSD ARLAVLAGKT EAEVKTLRRT LGVRPAYKRI DTCAAEFASP TAYMYSTYES
PFAGAVVDES APSDRTKVVI LGGGPNRIGQ GIEFDYCCCH ACFALSDAGF ETIMVNCNPE
TVSTDYDTAD RLYFEPLTAE DVLEIIDTER QNGTLHGVIV QFGGQTPLKL ARALEAADVP
ILGTSPEAID LAEDRDRFKR ILDRLKLKQP KNGIAYSVEQ ARLVAADLGL PLVVRPSYVL
GGRAMQIIRE ENQLGDYLLG TLPELVPADV KARYPNDKTG QINTVLGTNP LLFDRYLSDA
TEIDVDCLCD GKDTFVVGIM EHIEEAGIHS GDSACSLPPR SLDAATITEL ERQTRELALG
LDVIGLMNVQ YAIKDGDIYV LEVNPRASRT VPFVAKVVGL PVAKIAARIM AGEKLASFKL
KPQKLGHVGV KESVFPFARF PGVDTVLGPE MKSTGEVMGI DRSFEIAFAK SQLGGGTRLP
RKGTVFVSVR ETDKMRILET VKLLSSVGFR VMATSGTQRY LSDSGVPAEK INKVLEGRPH
IVDAITNGEV QLVFNTTDGP QALADSRSLR RAALLHKVPY YTTLSGAVAA AQGIRAYLGG
DLEVRTLQSY FSET
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