| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2799 |
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| Symbol | |
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| ID | 4030636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3084702 |
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| End bp | 3086603 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637971245 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_578031 |
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| Protein GI | 92118302 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCAG TTTCCCATCT TACGTCGCGC AATCTTCTCA TAGCCGTCCA CGACGCGCTG
GCGACCGTCG CGGCGGTTCT GGTTAGTTTC TATGTCCGGT TTGGAACCGC TCAGCTCGAT
GATCGCTTAC CGCTGCTCCT GACGATATTG CCGCCGTTCG TCATCCTGAG CGTCATTGTC
TGTTACATCT TCAACCTCAC GACCACCAAG TGGCGGTTTA TCTCTTTCCC TGACGTCTTC
AATATCGTGC GCGCGGCGAC GGTGCTGACC GTTGCGCTGA TCGCGCTCGA TTATATTTTT
GTGGCTCCGA ACGTTCAGGG AACGTTCTTT TTCGGCAAAG TCACCATTGT TCTGTATTGG
TTTCTTGAGA TCTTTTTTCT CTCCGGTCTT CGTTTTGTCT ATCGCTATTT TCGCTACACC
CGAACCCGTA ACAAAGCGCG AATCAGCGAT GCCGCGCCGG CGCTGCTGTT GGGACTAACC
GCCGACGTGG AGATTGCGCT CAGGGCGATC GAGAGCGGCG CGATCAAGCA ATTCTGGCCT
GTTGGTATTT TGTCGTCGTC GGCCGCCGAC CAGGGACAGC TCGTGCGCAA CACACCGGTG
CTGGGCAGCG TCGACGATCT GAAGGAGGTC GTTTCCGACT TTGCGTACCG CGACAAAGCG
ATCAAACGCC TAGTGTTGAC GGCTTCGGCG TTCAATGCCG AGTCCAAACC GGAATCAGTG
ATCATCCAGG CCCGTCAGCT CGGCTTGATC GTGAGCCAGC TTCCGTCATT ACAGGATGGT
TATGCGCCGC AACTTAGACC GGTTGCTGTC GAGGATCTGC TGTTGCGCTC CAGTGAAAAA
ATTGACTATG CGCGCCTCGA TGCATTTGTT CGAAACAAGG CGGTTATCGT CACCGGCGGC
GGCGGATCAA TCGGGTCGGA GATTTGCGAT CGTGTGGTCA CATTCGGTGC CGCGCGGCTC
CTTGTCATTG AAAATTCTGA GCCTGCGCTG TATGCGACCC TAGAAACTAC GCGAACGGGT
GAGGCATCCG TTGAGGGGCG GATTGCCGAT GTGCGCGATC GCGCCCGCAT CAGCCAGCTG
ATGAATGAAT TCAAGCCGGA TATCGTGTTT CACGCGGCGG CGCTCAAGCA TGTCCCGATC
CTGGAACGGG ACTGGACCGA GGGTATCAAA ACCAACATTT TCGGCTCGAT CAATGTTGCG
GACGCTGCTG TTGCGGCCGG CGCGGAGGCC ATGGTGATGA TTTCCACTGA CAAGGCGATC
GAGCCGGTCT CCATGCTCGG CCTGACCAAA CGGTTCGCTG AGATGTATTG CCAGGCGCTG
GATGAACAAC TTGCGGAGAA AGCGCCGCCT GTCGCCCCTG CGCGCCTGAT TTCGGTGCGG
TTCGGCAATG TGCTCGCATC AAAGGGTTCC GTGGTCCCGA AGTTCAAGGC GCAGATCGAG
GCGGGGGGGC CCGTCACGGT TACCCATCCG GACATGGTCC GCTACTTCAT GACCATCCGC
GAGGCTTGCG ATCTCGTCAT CACCGCAGCA GCTCACGCGT CATCCGGAAC CAACCGGAAC
GTATCGGTGT ACGTCCTCAA CATGGGGCAG CCGGTAAGGA TCGTCGATCT CGCCGAACGC
ATGATCGAAC TGTCAGGCTT GCAAGTTGGC CGTGATGTCG AGATCGTTTT CACCGGAGTA
CGGCCGGGCG AGCGGCTCAA CGAGATCTTG TTCGGAAATA AGGAAATGAC GGTCGAGATC
GGCATCAAAG GCATTCTTGC GGCGACGCCT AAGCAGCCAT CAATGCAGGC CTTGCGCGCC
TGGATCGCGA TCTTGGAGGA GGCGATCGAA CGCGACGACC GCGGCGCGAT CAAGGCGGCG
CTGATCGAGG CTGTACCCGA GTTTAGCCGC CAATCGGCGT AA
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| Protein sequence | MTPVSHLTSR NLLIAVHDAL ATVAAVLVSF YVRFGTAQLD DRLPLLLTIL PPFVILSVIV
CYIFNLTTTK WRFISFPDVF NIVRAATVLT VALIALDYIF VAPNVQGTFF FGKVTIVLYW
FLEIFFLSGL RFVYRYFRYT RTRNKARISD AAPALLLGLT ADVEIALRAI ESGAIKQFWP
VGILSSSAAD QGQLVRNTPV LGSVDDLKEV VSDFAYRDKA IKRLVLTASA FNAESKPESV
IIQARQLGLI VSQLPSLQDG YAPQLRPVAV EDLLLRSSEK IDYARLDAFV RNKAVIVTGG
GGSIGSEICD RVVTFGAARL LVIENSEPAL YATLETTRTG EASVEGRIAD VRDRARISQL
MNEFKPDIVF HAAALKHVPI LERDWTEGIK TNIFGSINVA DAAVAAGAEA MVMISTDKAI
EPVSMLGLTK RFAEMYCQAL DEQLAEKAPP VAPARLISVR FGNVLASKGS VVPKFKAQIE
AGGPVTVTHP DMVRYFMTIR EACDLVITAA AHASSGTNRN VSVYVLNMGQ PVRIVDLAER
MIELSGLQVG RDVEIVFTGV RPGERLNEIL FGNKEMTVEI GIKGILAATP KQPSMQALRA
WIAILEEAIE RDDRGAIKAA LIEAVPEFSR QSA
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