| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2771 |
|---|
| Symbol | |
|---|
| ID | 4031202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 3054288 |
|---|
| End bp | 3055133 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637971223 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_578009 |
|---|
| Protein GI | 92118280 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAATCG CAGTTTCCGG AGCGACGGGC TTCGTAGGCC GGCACGTCGT TGAACGGCTC
CTCGGTGATG GCCACGATAT CGTAGCTATC GCCCGCGATT CTGGGAAGGG TGCGGCGATG
CCGTGGGCCG ATCGCGTAAC GTTCGTGCCC TACGACCTAT ATCGCAATCC AGGCGCGCTC
ACGGCGCGCA TGGAATGCCC GCATGTCTTC GTGCACCTCG CATGGCCAGG ACTGCCGAAC
TATCGCGGTC TATTCAATCT CACCGAGAAT CTCGTGGCCG AGATCGCCCT GTTCCGGCAC
CTTCTCGAAT GGGGGGTACC ACACCTGGTC GTTGCGGGCA CCTGCCTCGA ATACGGCCTG
CAATTCGGGC CTCTTGCTGA GGACGGTGAG ACCCGGCCGA CCACACCCTA CGGTCTCGCC
AAGGACACGC TGCGCAAGAC CCTCCAGCTC ATGCAGGCGA CGCAGCCCTT CACACTGCAG
TGGATGCGCC TCTTCTACAT GTACGGACCC GGACAATCCG AGCAGAGCCT GCTCTCCCAG
CTCGACCGCG CTCTCGCGGA GGCGCGCGAA ACCTTCGACA TGTCGCAAGG CGACCAGTTG
CGGGACTATC TGCCAATAGA GGGGGTCGCC GACCGCTTTG CCCGCGTGAT CGGCCAGAAG
GCAGTTTCCG GTGTGATCAA TTGCTGCAGC GGACATCCAA TCTCGGTATT CGATCTCATC
CAGCGCCACC TCACCGCCAA CTCGAAGACT ATCCGCCTGA ACAGAGGCGT CTATCCCTAT
CCCGACTATG AGGCGATGGC CTTCTGGGGT CAGCCAGTTC AACTCCGGAG TTTGGGCTTT
CCATAG
|
|---|
| Protein sequence | MKIAVSGATG FVGRHVVERL LGDGHDIVAI ARDSGKGAAM PWADRVTFVP YDLYRNPGAL
TARMECPHVF VHLAWPGLPN YRGLFNLTEN LVAEIALFRH LLEWGVPHLV VAGTCLEYGL
QFGPLAEDGE TRPTTPYGLA KDTLRKTLQL MQATQPFTLQ WMRLFYMYGP GQSEQSLLSQ
LDRALAEARE TFDMSQGDQL RDYLPIEGVA DRFARVIGQK AVSGVINCCS GHPISVFDLI
QRHLTANSKT IRLNRGVYPY PDYEAMAFWG QPVQLRSLGF P
|
|---|
| |