| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2620 |
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| Symbol | |
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| ID | 4031143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2877892 |
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| End bp | 2878593 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637971075 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_577862 |
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| Protein GI | 92118133 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.498011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAGA CTTTTGTGCC GCGTCCTCTC GTCATCGCAC CGTCGATCCT GGCCTCGGAC
TTCTCGAAGC TGGGCGAGGA GGTCCGCGCC GTCGATCAGG GCGGCGCCGA CTGGATCCAC
CTCGACGTGA TGGACGGCCA TTTCGTTCCG AACATCTCCT ACGGCCCCGA TGTCATCAAG
GCGATGCGGC CGCACACGAA GAAGATTTTC GACGCCCATC TGATGATCTC GCCCTGCGAT
CCCTACCTCG AAGCCTTCGC CAAGGCCGGT TGCGATCACA TCACGGTTCA TGTCGAAGCA
GGGCCGCATC TGCATCGCTC GCTGCAGGCC ATCCGCGCAC TCGGCAAGAA GGCCGGCGTC
TCGCTCAATC CGGCGACGCC GCTTTCCACC ATCGAGTATG TCCTCGACAT GGTCGATCTG
GTGCTGGTGA TGTCGGTCAA TCCGGGTTTC GGCGGCCAGA AATTCATCAC CTCGGCGCTG
GACAAGATTC GGGATCTGCG CGCGATGACG GCGGGACGGC CGATCGACAT CGAGGTGGAC
GGCGGCGTCG CGCCCGACGT GGCGGGCGAG CTCGGCGCCG CCGGCGCCAA CGCCTTCGTG
GCGGGCTCGG CGGTGTTCAA GGGCGGCACG ATGGAATCCT ACAAGGCGAA CATGGACGCG
ATCCGCAGCG CCGCCGCCGC GGCGCGTGGC GAGTTGGTCT GA
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| Protein sequence | MSQTFVPRPL VIAPSILASD FSKLGEEVRA VDQGGADWIH LDVMDGHFVP NISYGPDVIK
AMRPHTKKIF DAHLMISPCD PYLEAFAKAG CDHITVHVEA GPHLHRSLQA IRALGKKAGV
SLNPATPLST IEYVLDMVDL VLVMSVNPGF GGQKFITSAL DKIRDLRAMT AGRPIDIEVD
GGVAPDVAGE LGAAGANAFV AGSAVFKGGT MESYKANMDA IRSAAAAARG ELV
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