Gene Nham_2561 details

Gene Information

• Locus tag: Nham_2561
• ID: 4032216
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: -
• Start bp: 2823769
• End bp: 2824362
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637971015
• Product: nuclear protein SET
• Protein accession: YP_577803
• Protein GI: 92118074
• COG category: [R] General function prediction only
• COG ID: [COG2940] Proteins containing SET domain

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.623984
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGTCA TTTCTCCGAA CAAGCCTTAT CGAATCGGTC GCTCCCGCAC CGGGCTCGGC 
CTCTTCGCCA CCAAGCCCAT CAAGAAGGGC ACGAAGATCA TCCGGTATTC CGGGCCGCTG 
CTCGACTGCA ACAAGGAGAA GGACGACGCG GTCGAGAACA AGTATCTCTT CCAGATCACC 
AACCGCTGGA CCATCGATGG CTCGCTGCGC AAGAACATCG CGCGCTACAT CAACCACTCC 
TGCAAACCGA ATGCGGAATC CGACGTCAGC AAGATCAAGC GTCGCGTCGA TATCCGCGCT 
ATCAAGGACA TCGCGCCCGG CGAGGAAATC AACTACGATT ACGGCACCGA TTACTTCAAG 
GAGTACCTGA AGCCGATCGG TTGCAAGTGC GACGCTTGCG AAAAGAAGCG CAAGAAGTTG 
CGGGCCGCGG CGCGCGAGGA GAAGAAGCGC GTCGGGGCGA GGGCCGAAAA GCGCGCCGGG 
GCCGCGCGCA ACGGCAAAAA GCTGAACGGC CACAAGGCGG CTGCCGCCGC TCCAAAAAAG 
TCGGAGGCTC GAACGACGGC GACGAAGGGC CGGAGGTCAA AGAAGCGTTC TTAA 

 

Protein sequence

MPVISPNKPY RIGRSRTGLG LFATKPIKKG TKIIRYSGPL LDCNKEKDDA VENKYLFQIT 
NRWTIDGSLR KNIARYINHS CKPNAESDVS KIKRRVDIRA IKDIAPGEEI NYDYGTDYFK 
EYLKPIGCKC DACEKKRKKL RAAAREEKKR VGARAEKRAG AARNGKKLNG HKAAAAAPKK 
SEARTTATKG RRSKKRS