Gene Nham_2557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2557 
Symbol 
ID4032212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2818326 
End bp2819399 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content65% 
IMG OID637971011 
Product3-hydroxyisobutyryl-CoA hydrolase 
Protein accessionYP_577799 
Protein GI92118070 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTA TTGCAGGCGA CGAGACCGAT CTGATCGCAC GGCGCGAGGG AAGCGCGGGT 
ATCATTCGCC TCAACCGCCC GAAGGCGATC AATGCCGTCA CCCTGGAGAT GTTCCGCGAG
ATCGGCAGCG CGCTGGACGA ATTCGAGGCG GATTCCGCCG TCGGTCTGAT CCTGCTCGAG
GGCGCGGGCG AGCGCGGCCT GTGCGCGGGC GGCGATATCC GCGCGCTCTG GGAAAGCGCG
AAGGAGGGGG GTGACCTCGG CAAGGTGCTG TGGCGCGAGG AATACATCCT CAACGCGCGG
ATCGCGAAAT TCCCCAAGCC ATATGTCGCT TTCATGGACG GCATCGTGAT GGGCGGCGGC
GTCGGATTGT CCGCGCATGG CGGGCACCGC GTCGTCACCG AGAGAACCAG ACTCGCAATG
CCCGAAGTCG GCCTCGGCTT CTTTCCGGAT GTCGGAGGCA CCTGGCTGTT GTCGCACGCG
CCTGGCGAGA CCGGAACCTA CTTCGGGTTG ACCGGCCAGC CCATGAACGG CCCCGACGCG
ATCTACGCCG GTTTTGCCGA TGTCGGGGTT CCGTCGCGAA AACTCGCCGC GCTGCGCGAG
GCGTTGGTCG ATCTCGGCAC CCGCGCGGAT GCGTCCCGCG TGAAAGCAAC GATCGCGGGC
TTTGCGAGCG GCGAAACCGC GGGCCCCGTC GCCGCCATCC GGCCGCGGAT CGATGCGTGG
TTCGCCCATG GTCGAATGGA TGATATCATC GCGGCCCTGA ATCGTGACGG CTCCGAACTC
GCGCGATCGA CCCTCAAGAC CCTGAACGAG AAGTCGCCGC GCGGCATGGT GGTGACGCTG
AAGCTGCTGC GGCTCGCGCG CGCCTCGGCC ACGCTGGAGG AGTGTCTCGC GCGTGAATAT
CGTGCAGCGC TCGCGGTCTT CGCCAGCGAC GACTTTCGCG AGGGCGTGCG GGCCGCGGTT
ATCGACAAGG ACCGCGAGCC AAAATGGTCG CCGCCGCGGA TCGATGAGGT TACGCCGGAA
ATGGTTGCGC CATATTTTGC CAACATCGGC GCGGATGAAC TTGTGTTCAA TTAG
 
Protein sequence
MKVIAGDETD LIARREGSAG IIRLNRPKAI NAVTLEMFRE IGSALDEFEA DSAVGLILLE 
GAGERGLCAG GDIRALWESA KEGGDLGKVL WREEYILNAR IAKFPKPYVA FMDGIVMGGG
VGLSAHGGHR VVTERTRLAM PEVGLGFFPD VGGTWLLSHA PGETGTYFGL TGQPMNGPDA
IYAGFADVGV PSRKLAALRE ALVDLGTRAD ASRVKATIAG FASGETAGPV AAIRPRIDAW
FAHGRMDDII AALNRDGSEL ARSTLKTLNE KSPRGMVVTL KLLRLARASA TLEECLAREY
RAALAVFASD DFREGVRAAV IDKDREPKWS PPRIDEVTPE MVAPYFANIG ADELVFN