| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2369 |
|---|
| Symbol | |
|---|
| ID | 4031118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 2633911 |
|---|
| End bp | 2636223 |
|---|
| Gene Length | 2313 bp |
|---|
| Protein Length | 770 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637970830 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_577621 |
|---|
| Protein GI | 92117892 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.87241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCTGC TCATTGATCT GCGAGGTTGC CACTATCATC AAGATCGTGG AATTCCGAGT
TATGCCCAGT CTCTCGCACT TCAGGTTGCG CGATCCGGCG CGGCGATATG CTCTTTCCTT
GTGCATAAAG ATAGGCCGTC TTTGAGTGAA GAGGGGGCGC TGAGAGAGTA CGGGGAGGTA
CTTTATCATG AGGACGTTTC TCGCGTCGGC ATACGTCGGT GCGACGCCTT CCTAATTACG
AGCTTGATGC ACGGGCTTGA CACGGTGGAT GAGCTGGAAC GATTGGCGGT TCCGTTAGAG
GTGATGGCAC ATCGTCCAAT GGTCTGCGCA GTCCTCTACG ATCTCATCCC GTTGATTTTC
AAGGAGGTGT ACCTCCAACA TCCGGCAACA TCTCGTGGAT ATTTTGCCGC GTTGAACACT
CTGAAACTAT GTGACCATAT CTTTTCGATC AGCGAGGCAA GCGCCAGCGA TGCTGTGCGG
ATCGCAGGAA TTTCGCCAGC AAAGATAACG ACAATTTGGG GCGGCATTGA CAGCAGTCGC
TGGGTCGTTA GTCACGAAAG TCATCTCAGC ACGCGATCCA CGGAAGTCGT CTATGTCGGA
GGCGAAGATT TCCGCAAGAA CATGGCGGGG CTGGTCCGGG GGTTTGGGCT TTACAAGAAG
AACAACCCAT ACAGCGAACT AAGTCTTGCT GTCGTTTGCT CTCAAAGCAG AGCCGGTAAG
AAGGTGATGT CTGAGCTCTT AAAGTCTGAA GATCTGAAGG AAGGAGTCGA TGTTAAGCTG
ACAGGCTACT TGGCTCATGA CGAATTGGTT AAAAGAGTGG CAAGCGCTAG ATCGTCGATT
TTCCCCAGCT TGTACGAAGG ACTGGGTCTT CCGATTCTTG AATCATACGC TGCAGGGACG
CCAGTGTTTG GGTCGGATAA AAGTGCAGTT GCCGAGATGG TGCACCCAGC GTGTCGGTTC
AATCCTTATT CGGTAGGATC GATTGCGGCG GCATTTGAAA ACATCGAGCA TCGCGAGGAG
TTATTTGAAG CGTCACTAGA ATTTGGCCGA GATATATTAG GAAAGTTCAG TTGGGGGAGG
TCTTCCAAGA TCGTAACGGC AACGATTTCC GGACAACTTG CTTCTAGAAG ACCAAGCGGT
CACCGGGCCG ACGTCCCTAT GATCGGGCTA TTTGGGCCTT CGTCACCGGA ACAGACCGGC
GTTGGCATTT ACAATTCCAC GGCATTTTCT GGAAGCAAGA AGCGCATTGT GCTGTTCACG
GACTTCACGG GCGAAAGATC CATTCAACAG AAAACGACCG CAATAAAGAC TCTCAGCAGA
AAGCCGGATC TGCTCTTAGC TCCGGTCGCT GAGTTCTCTC GTTTTCAGCC GCCGGGCAAC
TACCTTGCGC ACGTCTTTGC AATTGGGAAT TCACATCACA GCCTTTCCGC TCTCAAAGCC
GCAATAGGGA ATAGGGTAAT TGGAGTACCG CGCGTGCTTT ATTTGCATGA AGCACGCGTC
ACGGGGCTTC TGCTAGCCTA CTTCGGCGGG GACGCCAATA TGTTGGCATC GAGGCTCACA
GAGTATTACC CTGAACTCGG AGCTTGGTGT TGCCATAGAG CAACCCTCCT CGATATCTTG
AGCTGCCATG TTATGGGTGT TCGGTTACTG ATTGCGCTGA CTGGTGCATG CACGATCTTT
GTGAATTCTC GCCGTGCTAA AACGCTCATT GAAGCGGAAC TTTCGAGCTT CTCCGAGTGC
AAATTCGAAG TCCTCTTTCA CCCTGTCTTT CCGCCAGGGG ATGCCACACC AGAACGCCGC
GCTCCACATG ATGAAATCGT TATTGGTCAT TTTGGAATCG TCGGACCGAT GAAGAGACCG
GAATTGCTGA TCGCGGCATC GCGCATAATA TCTCATGATA GGAAGGTGCG TCTTCTTTTT
GCGGGTTACT CAGCAAGCGC GGCGATCCAT TCGCTGGATG CCCCCGAGTT TGTCGAATGT
ATCGACGCTC CGACGGATGC CCGCATGATA TCTCTCATGA GAGGGGTGGA CATCGCCGTT
CAGCCGCGTG AACCCGATCA CGGCGAATCG TCCGGAGTTA TTAACCAGTT GATCTCAGTG
GGTAAGCGTC CGATCACCAG TTCAGGAACA GCGGCAGACG ATCTCGGAGA ACTTGTTTTA
ACCGTACCGC GGGGGGCGAC CGCTAAGACA TGGTCGGACG CAATACTGAA GGTGCACGAA
TCGGACCGCA CCTCGATTTC TACCAAACAT CTTTCTGTTG AAGCCTTCGG ACGCGCTTTT
GATGCAGCCA TTGACCGACT GAAGGTTGAT TAG
|
|---|
| Protein sequence | MYLLIDLRGC HYHQDRGIPS YAQSLALQVA RSGAAICSFL VHKDRPSLSE EGALREYGEV
LYHEDVSRVG IRRCDAFLIT SLMHGLDTVD ELERLAVPLE VMAHRPMVCA VLYDLIPLIF
KEVYLQHPAT SRGYFAALNT LKLCDHIFSI SEASASDAVR IAGISPAKIT TIWGGIDSSR
WVVSHESHLS TRSTEVVYVG GEDFRKNMAG LVRGFGLYKK NNPYSELSLA VVCSQSRAGK
KVMSELLKSE DLKEGVDVKL TGYLAHDELV KRVASARSSI FPSLYEGLGL PILESYAAGT
PVFGSDKSAV AEMVHPACRF NPYSVGSIAA AFENIEHREE LFEASLEFGR DILGKFSWGR
SSKIVTATIS GQLASRRPSG HRADVPMIGL FGPSSPEQTG VGIYNSTAFS GSKKRIVLFT
DFTGERSIQQ KTTAIKTLSR KPDLLLAPVA EFSRFQPPGN YLAHVFAIGN SHHSLSALKA
AIGNRVIGVP RVLYLHEARV TGLLLAYFGG DANMLASRLT EYYPELGAWC CHRATLLDIL
SCHVMGVRLL IALTGACTIF VNSRRAKTLI EAELSSFSEC KFEVLFHPVF PPGDATPERR
APHDEIVIGH FGIVGPMKRP ELLIAASRII SHDRKVRLLF AGYSASAAIH SLDAPEFVEC
IDAPTDARMI SLMRGVDIAV QPREPDHGES SGVINQLISV GKRPITSSGT AADDLGELVL
TVPRGATAKT WSDAILKVHE SDRTSISTKH LSVEAFGRAF DAAIDRLKVD
|
|---|
| |