Gene Nham_2341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2341 
Symbol 
ID4032011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2606791 
End bp2607888 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content61% 
IMG OID637970802 
Productpermease YjgP/YjgQ 
Protein accessionYP_577593 
Protein GI92117864 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.231587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATGT TGACGAACAC ATTGGGCCGT TATTTTGCCA GCCGTTTTGT GGTGGCTGCG 
CTCGGCGTGT TCGCCAGCAT CTTCCTGCTT CTCGTTCTCG TCGATTACAT CGAAATGGTC
CGGAGGACGT CCGGACTTGC GTCGGCATCG GCAATCATGG TTGCGGAAAC ATCGCTTTTC
AGGGTGCCGC AACTGCTTGA GAAATTGACC CCGTTTTGTG TCCTGATCGG CGCCATGACC
TGCTACCTGG CCTTGTCGCG GCGGCTGGAA CTGGTGGTGG CGCGCGCCGC CGGCATCTCG
GCATGGCAAT TCATCTCGCC GGCACTCGCA TGCGCGCTCG TGCTCGGCGT CCTCGCGACC
ACGGCCTACA ATCCGATGTC AGCCAACCTG CGCGAATTAT CCAAGAAAAT GGAGGCCGAG
CTGTTCGGTA GCGTCTCGGG AGGGGGCCTG CAGGAGGCAT CCGGCTTCTG GATCAATCAG
GTGACGGACG ATGGCCAGGC CATCATCAAC GCCGCGCGCA GCGAGCAGCA AGGCGTCCGC
CTCACCGGAC TCACCGTGTT CAGGTTCGAT CCCGACTCCA CGTTCCGGGA GCGTATCGAG
GCACGCGAGG CGACCCTTGA GGACGGCCGC TGGCTATTCA AAGGCGTTCG CCGCTTTACG
CTCGACAGCC CCCCGGTCGA GCAGGAGACC TTCGTCCTCC CGACCAGTCT AACGGCGGCG
CAAGTTCGAA ACAGTTTCTC CACCCCCGAA ACCGTGTCAT TTTGGCAACT ACCGGGGTAT
ATCAGGTCGT CCGAGAGTTC AGGATTCGCT ACCGCAGGCT ACCGGCTGCA ATACCACAAA
CTCATCGCAC AGCCGTTTTT GCTGGCTGCA ATGGTGATGC TGGCGGCCTC GGTGAGCCTC
AGGTTCTTCC GCTTCGGCGG CGTGCAGAAG ATGGTTTTGA GTGGCGTGGG GTCAGGCTTT
CTGCTCTACG TCCTGTCCAA GGTAACCGAG GATTTGAGCA AGGCCGAGTT GATGAATCCA
ATCGCTGCGG CGTGGCTGCC CGTTTGCGTG GGCGGCCTCG CTGGCTTTTT GGTCTTGCTG
CACCAGGAGG ACGGGTAG
 
Protein sequence
MSMLTNTLGR YFASRFVVAA LGVFASIFLL LVLVDYIEMV RRTSGLASAS AIMVAETSLF 
RVPQLLEKLT PFCVLIGAMT CYLALSRRLE LVVARAAGIS AWQFISPALA CALVLGVLAT
TAYNPMSANL RELSKKMEAE LFGSVSGGGL QEASGFWINQ VTDDGQAIIN AARSEQQGVR
LTGLTVFRFD PDSTFRERIE AREATLEDGR WLFKGVRRFT LDSPPVEQET FVLPTSLTAA
QVRNSFSTPE TVSFWQLPGY IRSSESSGFA TAGYRLQYHK LIAQPFLLAA MVMLAASVSL
RFFRFGGVQK MVLSGVGSGF LLYVLSKVTE DLSKAELMNP IAAAWLPVCV GGLAGFLVLL
HQEDG