| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2289 |
|---|
| Symbol | |
|---|
| ID | 4032521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 2543612 |
|---|
| End bp | 2545102 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637970750 |
|---|
| Product | replicative DNA helicase |
|---|
| Protein accession | YP_577541 |
|---|
| Protein GI | 92117812 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATT CGAACATCCT GAAGCTTGCG CCTGACGCGG CAACGCCAGC CTACCGCACC
GCGCCGCACA ACATCGAAGC GGAGCGGGGT GTTCTCGGCG CCATTCTGGT CAACAACGAC
GCGTTTTACA GGGTTTCGGA TTTCCTCGAA CCGAAGCACT TCTTCGAGCC GATCCATCGG
ACCATCTTCG AGACCGCGGG CAGCCTGATT CGCGCCGGCA AGATCGCGAC GCCCGTCACG
GTCAAGACCT TCGTCCCCGC CGAGACCGAC ATCGGCGGAA TGACCGTAAG CCAGTACCTC
GCCCGTCTGG CGGCGGAAGC CACCACGATC ATCAACGCAC TCCATTATGG GCGCACCATC
TATGAGCAGG CACTGCGCCG CGACCTGATT CACATCGGCG AGGATATGGT CAACGTCGCC
TACGACGCGC CGGTCGATTT CGCGCCGCGG GCGCAGATCG AGGACGCCGA GCGTCGACTC
TACGAACTGG CCGAATCAGG CCGCTATGAA GGCGGCTTCC AGAAATTCTC GCAGGCGATG
AAGATCGCGC TCGACATGGC GGCCAACGCC TACCGCCGCG ATGGGAAGCT GTCCGGCATC
GCCACGGGAC TGCGCGATCT CGACTCGAAA ATGGGCGGAT TGCAGCAGTC CGACCTGATC
ATCGTCGCCG GCAGGCCGGG CATGGGCAAG ACCGCGCTCG CGACCAACAT CGCCTACAAC
ATCGCCAAGG CCCATCAGTC GGAGCTTCAG CCCGATGGCA CGATGAAGAC CGTCAATGGC
GGCATCGTGG GCTTCTTCTC CTGCGAAATG TCGGCGGAGC AACTGGCGAC GCGTATTCTC
GCCGAGCAGA CCTGCATCCC CTCCAGCAAT ATCCGGCGCG GCGGCATCAC CGAAAGCGAT
TTCGAGAAGA TCCGCGATCA CACCATCGAG CTGGAGCACC TGCCGCTCTT CGTCGATGAA
ACCGGCGGCC TCTCGATTTC ACAACTAACG GCGCGCGCCC GCCGCCTGAA GCGCCAGAGA
GGGCTGGACG TACTGGTCAT CGACTACATC CAGCTTCTGC TGGGCAGCGG CAAGCGCTCC
GACAACCGGG TGCAGGAAGT CACCGAAATC ACCACCAGCC TGAAAGCGCT GGCGAAGGAG
CTGAATGTTC CGATCGTCGC GCTGTCGCAA CTGTCCCGTC AGGTCGAAAA CCGCGACGAC
AAACGCCCGC AGCTCTCAGA CCTTCGCGAA TCCGGTTCGA TCGAACAGGA TGCCGATGTC
GTGATGTTTG TATTCCGCGA GGAATACTAC CTCCAGAACA AGGAGCCGCG GCCGGGTACG
CCGGAATACG AGAAGTGGCA ACTCGACATG TCGCTGGTGC ACGGCAAGGC CGAAGTCATC
ATCGGCAAGC AGCGCCATGG GCCGACCGGC ACCGTCGAAC TGCAATTCGA GGGACAATTC
ACCCGCTTCA GCGACCTCGC GCACGACGGT CACCTGCCCG ACCGTATCTA G
|
|---|
| Protein sequence | MADSNILKLA PDAATPAYRT APHNIEAERG VLGAILVNND AFYRVSDFLE PKHFFEPIHR
TIFETAGSLI RAGKIATPVT VKTFVPAETD IGGMTVSQYL ARLAAEATTI INALHYGRTI
YEQALRRDLI HIGEDMVNVA YDAPVDFAPR AQIEDAERRL YELAESGRYE GGFQKFSQAM
KIALDMAANA YRRDGKLSGI ATGLRDLDSK MGGLQQSDLI IVAGRPGMGK TALATNIAYN
IAKAHQSELQ PDGTMKTVNG GIVGFFSCEM SAEQLATRIL AEQTCIPSSN IRRGGITESD
FEKIRDHTIE LEHLPLFVDE TGGLSISQLT ARARRLKRQR GLDVLVIDYI QLLLGSGKRS
DNRVQEVTEI TTSLKALAKE LNVPIVALSQ LSRQVENRDD KRPQLSDLRE SGSIEQDADV
VMFVFREEYY LQNKEPRPGT PEYEKWQLDM SLVHGKAEVI IGKQRHGPTG TVELQFEGQF
TRFSDLAHDG HLPDRI
|
|---|
| |