| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2263 |
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| Symbol | |
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| ID | 4033186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2514154 |
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| End bp | 2516403 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637970723 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_577515 |
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| Protein GI | 92117786 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.501845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACATTGC TTGCCCACGC ATCAAGGTTG CGAACGACGG CTTTGGGAGC GAGCCTAGTG
CTGGCGGCCG GACTCTGGGC CGGAGCCGCG GATGCCGAGA AAGCCGCCAA GGCTCCAGCA
CCGAAGCCGC GACCGATTTC ACGTCACGTC GTTCCGAAGA CGGTCACCGG CCATACGCAT
GGCAAGATCC CGACCCCGGC GCACCGCAAG ATCTCAGCCC CGGACAAAAA CAAAGCCAAG
GCCACCGTAG CTCCGGCAAT TCAACCGGCC ACACGCCAGC ACGCCGTGCT CCCGCCGCCG
TCGAAACGCC AGCCCGTTCC GAGAGCCGCG ATGGCCGCGA CGTCATCGAC GTCGCGCGCC
GATCTCGATG CGCTTGCGAA CGTCATCGAC CTGACCCGCA AGAACAGGCA GTCCGATGCC
ACGCAGGTCG AAGCCAGCAT GACAGATCCG GTAGCGCGCA AGCTCGCCGA GTGGATCATC
CTGCGCAGCA ACGACAATGG CGCGCCGACC GAGCGCTACC GCGCCTTCAT CGCCGCCAAT
CCGAGCTGGC CCTCGCAGAC GTTCCTGCGC AAACGCGCGG AGGCTGCACT ATGGGACGAC
CATCGCGACG ATGCCGCCGT GCTGGCCTGG TTCGAAAACG AACGGCCGCT GTCGGCGAAG
GGACGGTTCG CACTGGCGCG CGCGCTGCTC GCGCGCGGCG ACCGCGCCAG GGCCGCACAT
CTGGTCCGCG AGGCCTGGCG GACCGACTCC ATGTCGGAAG CGGTCGAGAG GATGGCGCTG
GAGGAGTTCG GGGCGCTGCT GGCGCCGGGC GATCAGAAAG CCCGGATGGA TTATCTGCTT
TACGGCAACG AGCGCGATGC GGCGCTACGC GCGGCGAAGC GGCTCGGAAA CGCCGAGGTC
GCCCTCGCCA GGGCACGGAT TGCCGCCGAC CGCAAATCCT CCAGCCTGCA CTCGCTGCTC
GACAAGGTAC CGCGCGAGCT GCACGGCGAC CCCGGCTATA TCTTCGCCCG CATTCAGCTT
TTGCGCCGCG AGGAGAAGTT CGCGGAAGCC GCGCGGCTGA TGCTGAACGC GCCGCGGGAT
CCCAACCGGC TTTACAATGT GGATGAATGG TGGATCGAGC GACGGCTGCT TGCGCGCAAG
ATGATCGACA TCGGCGAGTA CCGCACCGCG TATCTCATCG CGCGCGATGC GGCGCTCCCC
GCGCGGGATA TCTACAAGAC CGAGCAGGAG TTCACCGCCG GCTGGATCGC CCTGCGTTTC
CTGAAGGACC CCAACACCGC CACCCGGCAT TTCGCCCGCA TCGGCGTCGG CAGCGTCAAC
CCGACCGCTC TGGCGCGGGC CGGCTACTGG CAAGGTCGCG CCGCCGAGGC GGCAGGCCGC
GTTCAGGAGG CCCGTCACGC CTATGCCGCG GCCGCCGAAC AGTCCACCAG CTATTACGGC
CAGCTCGCGC GCGCGAAGCT CGGACTGCCG CAGATCGAAT TGCGCAGCAT CCCCGGCAGC
CGGTCGCGCG GCGTCGAACG GCTGGAGATC GTGCGCGCCG TCCAGCTTCT TTATGCGATC
GGCAAAGGCG ACTTCGCGAT CCCGATCTTT GCCGATATAG GCGAAAACGG CGACCCCGAT
GCGGTGCTGG GTCTGGGCGA ACTCGCCGCG CGTCACGGCG ACGCACGGGG TATGCTGCTA
GCCGGCAAGG CCGCGCTCAA TCGCGGACTG CCGTTCGATT TCTATGCCTA TCCGGTCAGC
GGAATTCCTC CTTTCCGTTC GATCGGGCCG GATGTCGAGC GCAGCGTCGT CTATGCGATC
GCGCGGCAGG AAAGCGCGTT CAATCCGTCT GTGGTGTCGC CGGCCCACGC CTACGGGCTG
ATGCAGGTGA CGCCGGATGC TGGAAAATAT GTCTGCAAAA AATACGGCGC CAGCTTCGAC
CTTCATCGCC TGAAAAACGA GCCCGCCTAT AACGCCGCGC TCGGCGCAGC GGAGCTCGGA
GGTCTGCTCG AAGACTATCG CGGCTCCTAC ATCATGACCT TCGCCGCCTA CAATGCCGGA
CGCGGCAGCG TCAGGAAATG GATCGCGCGC TACGGCGATC CGCGCGATCC CGGGGTCGAT
GCGGTGGATT GGGTCGAGCT GATCCCGTTC TCGGAGACGC GCAACTACGT ACAGCGCATC
ATGGAGAACC TGCAGGTCTA TCGCGCCCGC TTCGGCGGCG GCTCGAAGTT GCAGATCGAG
GCGGACCTGC ACCGCGGCTC CATCCAATAG
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| Protein sequence | MTLLAHASRL RTTALGASLV LAAGLWAGAA DAEKAAKAPA PKPRPISRHV VPKTVTGHTH
GKIPTPAHRK ISAPDKNKAK ATVAPAIQPA TRQHAVLPPP SKRQPVPRAA MAATSSTSRA
DLDALANVID LTRKNRQSDA TQVEASMTDP VARKLAEWII LRSNDNGAPT ERYRAFIAAN
PSWPSQTFLR KRAEAALWDD HRDDAAVLAW FENERPLSAK GRFALARALL ARGDRARAAH
LVREAWRTDS MSEAVERMAL EEFGALLAPG DQKARMDYLL YGNERDAALR AAKRLGNAEV
ALARARIAAD RKSSSLHSLL DKVPRELHGD PGYIFARIQL LRREEKFAEA ARLMLNAPRD
PNRLYNVDEW WIERRLLARK MIDIGEYRTA YLIARDAALP ARDIYKTEQE FTAGWIALRF
LKDPNTATRH FARIGVGSVN PTALARAGYW QGRAAEAAGR VQEARHAYAA AAEQSTSYYG
QLARAKLGLP QIELRSIPGS RSRGVERLEI VRAVQLLYAI GKGDFAIPIF ADIGENGDPD
AVLGLGELAA RHGDARGMLL AGKAALNRGL PFDFYAYPVS GIPPFRSIGP DVERSVVYAI
ARQESAFNPS VVSPAHAYGL MQVTPDAGKY VCKKYGASFD LHRLKNEPAY NAALGAAELG
GLLEDYRGSY IMTFAAYNAG RGSVRKWIAR YGDPRDPGVD AVDWVELIPF SETRNYVQRI
MENLQVYRAR FGGGSKLQIE ADLHRGSIQ
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