Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2248 |
Symbol | recO |
ID | 4033171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 2501519 |
End bp | 2502280 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637970708 |
Product | DNA repair protein RecO |
Protein accession | YP_577500 |
Protein GI | 92117771 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0352637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATGGA CCGACGATGG CATCGTGCTC GGGGTGCGGC GGCATGGCGA ATCCTCAGCC ATCGTCGAAC TGCTGACGCG CGGCCACGGC CGCCATCTCG GCCTTGTGCG CGGAGGGGCG GGATCGCGGA TGCGCCCGCT GTTGCAGCCC GGAAATTCGG TCAGCGCGCT GTGGCGCGCG CGGCTCGACG AACATCTCGG CGCCTATGCG CTGGAAGGCA CCCGGATGCG AGCCGCCAAC CTGCTCGGTG CATCCCATGC GACCTATGGC GTGACCCACC TGGCGTCGCT GGCGCGGCTG TTGCCCGAGC GCGATCCGCA TGACGGCATT TTCGAGAGGC TGGAACGGAC GCTGGACGAT TTCGACACGG CGGGCGAGGC GGCGATCCAT CTGATCCGGT TCGAACTGGC GATGCTGACC GAACTCGGTT TCGGCCTCGA TCTATCGACG TGTGTGGCGA CTGGTACCAC CACCGAACTG ATCTACGTCT CACCGAAATC GGGCGGGGCG GTGTCGCGGC AGGCCGGCGA GCCGTGGCGC GACCGGCTGC TGCGGCTGCC ACCGTTTCTG CGCGAGGCTG ACGAAGAACA AAGCGGCTGG TCGGATCAGG ACTTGCTGGA TGGATTCGAA CTGACAGGCC GGTTCCTGCT GCGCCACGTG CTGGAGCCGC GGGGGCAAGG ACATTCTGAT GCGCGCGCCG GGTTCATCAA CGCAGTTGTG AAGCATCAGG CGCGGGCGAG CGCAGCGGCG ATTTCCGGAT AG
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Protein sequence | MEWTDDGIVL GVRRHGESSA IVELLTRGHG RHLGLVRGGA GSRMRPLLQP GNSVSALWRA RLDEHLGAYA LEGTRMRAAN LLGASHATYG VTHLASLARL LPERDPHDGI FERLERTLDD FDTAGEAAIH LIRFELAMLT ELGFGLDLST CVATGTTTEL IYVSPKSGGA VSRQAGEPWR DRLLRLPPFL READEEQSGW SDQDLLDGFE LTGRFLLRHV LEPRGQGHSD ARAGFINAVV KHQARASAAA ISG
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