Gene Nham_2207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2207 
Symbol 
ID4032044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2455367 
End bp2456803 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content60% 
IMG OID637970664 
ProductNADH dehydrogenase subunit N 
Protein accessionYP_577459 
Protein GI92117730 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTTG AGGCCGCCGG GTATCAACTG CTTCCCGTAT TGCCGGAAAT CGTGCTGGCG 
ATCGGCGCGA TGGCGTTGCT GACGATCGGG GCGTGGTGCG GCCAGCGCGC GGCTGCTCTC
GTTACGGTCC TGGCGGTATG CCTTCTCGTC GCGACCGGCG TGATTGAGTA TCTGCTGCCC
AGGGGCAAGC TGATTACGTT CGGCGGCAGC TTCATCGTCG ATGATTTCGC GCGGTTTCTG
AAAATTCTTG CTTTGCTCGG CTCGGCGGCG ACGCTCGTTC TGTCGCGCCA GTTTCTTGAA
AACCAGTCCC GGCGGATGTT CGAGTTCGCG ATTCTGGTGA TGCTCTCGAC GGTCGGCATG
ATGGTGCTGA TTTCGGCGGC CGACCTGATC ATGCTGTATC TCGGGCTCGA GTTGATGAGC
CTTGCGCTTT ACGTGGTGGC GGCGAGCGAC CGTGACAACG TCAAATCGAC CGAGGCAGGC
TTGAAATACT TCGTTCTCGG CGCGCTGGCG TCCGGGATGC TGCTGTACGG CGCTTCGCTG
ATCTATGGTT TCACGGGAAC CGTCAGCTTT GCGGGCATTG CAGCCGCTGC CAAGACCGGC
AGCATCGGCG TTGTGTTCGG CATCGTCTTC CTGCTGGCGG GCCTGTGCTT CAAGGTGTCG
GTGGTGCCGT TTCACATGTG GACACCCGAC GTTTATGAAG GCGCGCCGAC GCCGGTTACG
GCATTCTTCT CCTCGGCGCC GAAGGTCGCG GCAATGGCGG TGTTTACCCG CGTGGTGCTG
ACGGCGTTCT CCGGCGTTGT TACCGAGTGG CAGCAGATCG TGGTTTTCGT GGCGATCGCG
TCCATGGCGC TGGGTTCGTT CGGCGCGATC GGACAGCGCA ACATCAAGCG CATGATGGCT
TATTCGTCGA TCGGCCATAT GGGTTTTGCG CTGGTCGGTC TCGCCGCCGG CACCGTCGAA
GGCGCGCAGG GCGTCGTGCT TTATATGGTC ATCTATACCG TCATGACGTT CGGAGCGTTC
ACCGTCATTC TCGCCATGAG CCGTAAAGGC CAAGCCCTGG AGCAGATCAG CGATTTCGCT
GGGCTGTCGC GGACCAATCC GCTGCTGGCG TTCTTCTTTG CAATGCTGCT GTTCTCGCTG
GCCGGAATTC CGCCGTTGGC AGGCTTCTTC GCCAAATTCT ATGTCTTCAC CGCTGCGATC
AAGGCGGGAC TGGTCGCGCT GTCCGTGATC GGCGTCATCA CCAGCGTGGT CGGCGCGTTC
TACTACCTCA ACGTCATCAA GGTGATGTAT TTCGACGAGC GGGACGAAGC GACAGACGCC
GTGCATATCG AATTGCGTTC GGTGGTGGCG GTGACGGCGC TCTTCAACAT GCTGTTCTTT
GCCTATCCGG GGCCGCTGGT CAGCGCCGCC ACGGCGGCAG CGAAGTCATT ATTCTGA
 
Protein sequence
MMFEAAGYQL LPVLPEIVLA IGAMALLTIG AWCGQRAAAL VTVLAVCLLV ATGVIEYLLP 
RGKLITFGGS FIVDDFARFL KILALLGSAA TLVLSRQFLE NQSRRMFEFA ILVMLSTVGM
MVLISAADLI MLYLGLELMS LALYVVAASD RDNVKSTEAG LKYFVLGALA SGMLLYGASL
IYGFTGTVSF AGIAAAAKTG SIGVVFGIVF LLAGLCFKVS VVPFHMWTPD VYEGAPTPVT
AFFSSAPKVA AMAVFTRVVL TAFSGVVTEW QQIVVFVAIA SMALGSFGAI GQRNIKRMMA
YSSIGHMGFA LVGLAAGTVE GAQGVVLYMV IYTVMTFGAF TVILAMSRKG QALEQISDFA
GLSRTNPLLA FFFAMLLFSL AGIPPLAGFF AKFYVFTAAI KAGLVALSVI GVITSVVGAF
YYLNVIKVMY FDERDEATDA VHIELRSVVA VTALFNMLFF AYPGPLVSAA TAAAKSLF