| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2178 |
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| Symbol | |
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| ID | 4032674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2422948 |
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| End bp | 2426442 |
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| Gene Length | 3495 bp |
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| Protein Length | 1164 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637970636 |
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| Product | indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | YP_577431 |
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| Protein GI | 92117702 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAATCA ACCAAGGTCC GATCAACCTC GATCAGAAAT ACACCCAGGG CACCGGCCAC
GTCTTCATAA CGGGCATTCA GGCGCTTGTT CGGTTGCCGA TGGCGCAAAT CCGCCGCGAC
CGCGCCGCGG GCCTCAACAC CGCGGGATTC ATTTCCGGCT ATCGCGGCTC GCCGCTCGGC
GGCTACGACC AGCAGCTCGT CGCCGCGCGC AGCCATCTCG ACCAATACAA CATCAAATTC
CAGCCCGGCG TAAACGAGGA CCTCGCGGCG ACTGCGATCT GGGGCTCACA ACAGCTCCAC
CTTTCGCCGG GCGCGCGCTA CGATGGCGTC GTCGGAATCT GGTACGGCAA GGGTCCCGGC
GTCGATCGCT GCGGCGACGT ATTCCGTCAC GGCAATGCCG CAGGCTCGGC CATGAACGGC
GGCGTACTCT GCCTGGCCGG CGACGACCAC GGCGCCAAAT CCTCGACCGT GCCGCATCAG
TCGGACCACG CCTTCATCGC GGCGCTGATG CCCTATCTCT ATCCGTCCTC GATCCATGAA
ATGATCCAGA TGGGCCTGCT CGGCATCGCG ATGTCGCGCT ATTCCGGCTG CTGGGTCGGG
ATGAAGGTCA TCACCGAGAC GGTGGAGACC ACCGCCGAGA TCGACCTCGC CGACGAACTG
AATCCGTTTG TCATGCCAAC CGATTTCGAG ATGCCGCCGG GTGGGTTGAA CCTGCGCTGG
CCCGACGACC GCTACGATCA GGACCGGCGC TTGCAGGATC ACAAGGGTTT TGCCGCGGTC
GCGTTCGCGC GCACCAACAA GATCAACCGC ATTACCATGG ATTCGCCGCA CGCGCGGTTC
GGCATCATGG CGTCCGGCAA GAGCTACGAA GACATTCGTC AGGCCTTGCG CGAGCTTGGC
ATCACCGAGC AGGTCGCCGC GAAAATCGGC TTGCGGCTTT ACAAGATCGG CATGCCATGG
CCGCTGGAGC CGCAGGGCGT GCGCGAATTC GCCGTCGGAC TCGAGGAGAT CTTCATCATC
GAGGAACGAC GCGAGATCGT CGAGAACCAG GTCAAGCAGG AGCTGTTCAA CTGGCGCGAC
GACGTGCGGC CGCGCATCAT CGGCAAGATG GATGATCGCG ACAAGCCGTT CCTCCCGTTC
GCGCAGGAAT TGAGCGTCGC GTCGCTGGCG ACATCGCTTG CCGAGCGGCT GCTGCGCCTC
AACCTCAATC CGGAAATCGC CGAAATTCTG CGCGCTAAAG CCGACTGGTT CAACGGCCGG
CTGGCGACGC AAATGCAGGC GGCGGCCCCG GTTACGCGTA CGCCGTATTT TTGCTCGGGC
TGCCCGCACA ACACCTCGAC CAGGGTGCCT GACGGCAGCC GCGCCATGGC CGGCATCGGC
TGTCACTTCA TGGCGCTGTG GATGGATCGC AATACCGAAA CGTTCACCCA CATGGGCGGT
GAGGGGGCGC CGTGGGTCGG AATCGCGCCG TTCACCGGGG AGAAGCACAT CTTCGCCAAT
CTCGGCGACG GCACCTATTT CCATTCCGGG AGCCTCGCGA TCCGTCAGGC GGTCGCTTCC
AAGGCGAACA TCACCTACAA GATTCTCTAC AACGATGCCG TCGCCATGAC CGGCGGCCAG
CCTGTCGACG GCGAACTGTC GCCGCAGCGG ATCACCTTCC AGCTTCACGC CGAAGGTATC
CGCGACATCT ACCTCGTGTC CGAGAATCCG GTCGCCTATC CGGCGGCCGA TATCGCGCCG
GGGACCAGAA CCGCGCATCG CGACGACCTT GATGCGGTCA TGAAAACCTG CCGCGAGATC
AAGGGCGCCT CGGCGATCGT GTTCGTGCAG ACATGCGCCG CCGAGAAGCG CCGCCGCCGC
AAGCGCGGTA CCATGGAAGA CCCGCAGCGC CGTGTGTTGA TCAATCCCGC CGTCTGCGAA
GGCTGCGGCG ACTGCTCGGT GCAGTCGAAC TGCATTTCGG TGGAGCCGCT GGAGACCGAG
ATGGGACGCA AGCGCACCAT CAATCAGTCG TCCTGCAACA AGGATTATTC CTGCATCAAG
GGATTTTGTC CGTCGTTTGT CACGGTCGAC GGAGGGCGCC TGCGCCAGCG CGCGCCGGCG
GACCTCGGGG CGATCGGCGA ACTGCCGGAA CCGCCTTCGC GGCCGTCGCT TGAGCAACCT
TACAACATCG CGGTCGGAGG TGTCGGCGGC ACCGGCGTGC TGACCATCGG CGCGCTGCTC
GGCATGGCTG CGCATATCGA GGGCAAGGCC AGCATGATCC TCGATATGTC CGGCCTCGCC
CAGAAGGGCG GCGCGGTTCT GAGCCATGTC CGGCTGTCCG AGAAACCCGC TGACGTGACC
TGTTCGCGCA TCGTCACCGG CACCGCCGAT CTCGTTATCG CCGCTGATGA GGTGGTGGCG
GCCGCCAGGG ACACGTTGAT GCTGTGCGAG TCGAGCCGCA CCCGCGGCGT CATCAATACT
CACCTGATCC CGACTGCCGG CTTTGTTCTT GACCGCGATT TCAATTTCCA GAGCGGCAAA
GTCGGCCTCG TCCTTGAAAC CGCGCTGCGC AAGGATTCGA CCTTCATGAA TTTCACCAGG
CCGGCCGAGA TGCTGCTCGG CGACTCCATC GCCACCAACA TGATGATGAT GGGGTACGCC
TATCAGAAAG GCCTGCTGCC GCTGACGACG GCAGCGATCG AGCAGGCGAT CGAGGTGAAC
GGTGTTGCCG TCAGGATGAA TATCGAGGCG TTCCGGCTGG GACGGCTTGC GGCGGCCGAT
ACTGCGCGTC TCGCGGCGAT GATGAAGGGG AAGGACGAGA CCGTCGCGCC GAAGATACTC
GAAGACATGT CGCTCGACGA GATCGTTGCG CACCGCTCGG CGCACCTTGC CGGCTACCAG
AACAGGACGC TTGCAGAAAA ATATCGTGCG CTGGTGACGC GGGTGCGTCA GGCGGCAAGC
GATGGCGGCT ACGGGGAGGC GTTGCCGCGC GCGGTGGCAA TCAATTACGC CAAACTGCTG
GCCTACAAGG ACGAGTACGA GGTGGCGCGC CTCTATACCG ACGGCAGCTT CGAGAAGCAG
CTCGGCGACC GGCTCGAAGG CGACTACAAG ATCAGCTTCC ACCTCGCGCC GCCGATGTTC
GCCAACAAAA AGGACGCGCT CGGCCGGCCC GTCAAGAAGT CGTATGACGG GTCGCGGATG
ATGCCGGTTT TTCGTCTGCT GGCGAGGATG AAGGGTTTGC GCGGCACTCC TTTCGACGTG
TTCGGCTACA GCACTGAGCG CAGGTTGGAG CGCGACCTGA TCGCGGGTTA CGAAAAGGAT
GTGGCGTTCG TGCTCGACAA GCTTTCGCCG GTCAATGTCG AAAGTGCGAT CGCGTTGTTG
TCACTGCCGG ATCGCATCCG CGGCTACGGC CCGGTCAAGG AGAAGGCGAT GGTCGACGCT
AAAGCCCGTT ATGCGGAATT AGTGCGCGAT TTCGCGGATC CTCCGCCCGC GCCACGGCAG
ATAGCAGCGG AATAG
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| Protein sequence | MGINQGPINL DQKYTQGTGH VFITGIQALV RLPMAQIRRD RAAGLNTAGF ISGYRGSPLG
GYDQQLVAAR SHLDQYNIKF QPGVNEDLAA TAIWGSQQLH LSPGARYDGV VGIWYGKGPG
VDRCGDVFRH GNAAGSAMNG GVLCLAGDDH GAKSSTVPHQ SDHAFIAALM PYLYPSSIHE
MIQMGLLGIA MSRYSGCWVG MKVITETVET TAEIDLADEL NPFVMPTDFE MPPGGLNLRW
PDDRYDQDRR LQDHKGFAAV AFARTNKINR ITMDSPHARF GIMASGKSYE DIRQALRELG
ITEQVAAKIG LRLYKIGMPW PLEPQGVREF AVGLEEIFII EERREIVENQ VKQELFNWRD
DVRPRIIGKM DDRDKPFLPF AQELSVASLA TSLAERLLRL NLNPEIAEIL RAKADWFNGR
LATQMQAAAP VTRTPYFCSG CPHNTSTRVP DGSRAMAGIG CHFMALWMDR NTETFTHMGG
EGAPWVGIAP FTGEKHIFAN LGDGTYFHSG SLAIRQAVAS KANITYKILY NDAVAMTGGQ
PVDGELSPQR ITFQLHAEGI RDIYLVSENP VAYPAADIAP GTRTAHRDDL DAVMKTCREI
KGASAIVFVQ TCAAEKRRRR KRGTMEDPQR RVLINPAVCE GCGDCSVQSN CISVEPLETE
MGRKRTINQS SCNKDYSCIK GFCPSFVTVD GGRLRQRAPA DLGAIGELPE PPSRPSLEQP
YNIAVGGVGG TGVLTIGALL GMAAHIEGKA SMILDMSGLA QKGGAVLSHV RLSEKPADVT
CSRIVTGTAD LVIAADEVVA AARDTLMLCE SSRTRGVINT HLIPTAGFVL DRDFNFQSGK
VGLVLETALR KDSTFMNFTR PAEMLLGDSI ATNMMMMGYA YQKGLLPLTT AAIEQAIEVN
GVAVRMNIEA FRLGRLAAAD TARLAAMMKG KDETVAPKIL EDMSLDEIVA HRSAHLAGYQ
NRTLAEKYRA LVTRVRQAAS DGGYGEALPR AVAINYAKLL AYKDEYEVAR LYTDGSFEKQ
LGDRLEGDYK ISFHLAPPMF ANKKDALGRP VKKSYDGSRM MPVFRLLARM KGLRGTPFDV
FGYSTERRLE RDLIAGYEKD VAFVLDKLSP VNVESAIALL SLPDRIRGYG PVKEKAMVDA
KARYAELVRD FADPPPAPRQ IAAE
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