Gene Nham_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2162 
Symbol 
ID4029528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2402682 
End bp2402945 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content60% 
IMG OID637970621 
Producthypothetical protein 
Protein accessionYP_577417 
Protein GI92117688 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCCGTG AGTCTGTATT CGTGGCGACG CTCGATAAAG TATCCGTCGA TCTCATGGTG 
GTCCTGGGGA CCACGTCGAT GCCCGTTCAT CAGGTCATGC GACTCAGCCG CGGCGCCATT
ATCGAGCTTG ATGCCACCGA GCAGGACGAG GTCAAGATCC TCGCCAACAA CCTGCCGGTC
GCCAGCGGGG TGGTGGTGGT CAATCGCAAT CGCATCGCGG TCGAAGTCAA GCAGATGCTG
CCGCGGACGC CGGACCACAG ATAA
 
Protein sequence
MVRESVFVAT LDKVSVDLMV VLGTTSMPVH QVMRLSRGAI IELDATEQDE VKILANNLPV 
ASGVVVVNRN RIAVEVKQML PRTPDHR