| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1993 |
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| Symbol | |
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| ID | 4031546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2208327 |
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| End bp | 2210432 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637970450 |
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| Product | helicase c2 |
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| Protein accession | YP_577252 |
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| Protein GI | 92117523 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.214051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGAGCC TGTCCATACA GCGCAACGAT CACGAACATG CTACGCTGCA TGAAGCGTTG
TCCAACCTGT TCCAGCCGCT TCTCGATGCA ACAGATTTTG GCCGGCTCAC GGGTGAGATC
GACGACAACC TCGCCGATGC AGCCTGGGTG GAGAAATTGC CGACACCGGC CTTTGCGCCG
ATTGCGGCAG AATTTGTTGG CATCGTCGAC CAGCACGTCG GACCAATCGA GGATCTCCGT
TACACGTGGC GGCTTCTACG AGACAATTTG CACGCCTGTC ACGTCTATCT CACCCCACAG
CAGATCTACG TTCGTCCGCT CATTCCACCA ACGTGGACCC ACACACCCTT CACGGCTGCG
CGGCAACGCA TCTACATGTC TGCGACGCTG GGCGAAGGCG GCGACCTTGA ACGTCTGACG
GGCAGGCAAA ACATCACACG GCTTCCTGTG CCGCCGGGAT GGGACCGCCA AGGTATCGGG
CGCCGGTTCT TCATCTTTCC CGAAATGACG TTAGATTCCG ACGAGACGGA CGAACTGCGT
CAGACGTTGA TGCAGCGGGT GCCGCGAAGC GTTTTCCTAG TGCCAAATGA CCGGACGAAG
GACGAAGTTG TCCGGGAGGC TCGGTCGCTC GGCATCACCA CATTCGATGC AACAGCAATC
GAAGAATCCA AGGCCGGGTT CGTTACGGCG ACCGGCGCCG CCGCCGTGTT CGCCAACCGT
TACGACGGCA TCGATTTTCC GGGCGACGAA TGCCGACTGC TCTTCCTCGA TGGCCTGCCG
AGGACGACCA ACCCGCAGGA GCGCTTCTTC GTTGCCAAGA TGGGCGCGAA CGCGCTGCTC
CAGGGCCGAA TCCAGACGCG GGTCGTGCAG GCGGTTGGCC GCTGCACGCG GTCTCTCCAG
GATTATTCGG CCGTCGTGGT GACCGGCAGC GAACTGACGG ACTATCTAAA CAGTCCGGCC
AGGCTGAGTT TTCTGCATCC TGAGTTGCAG GCCGAATTGG ATTTCGGCGC GCGCCAATCG
ACCAGCGTCT CGATCGCAGA CTTGGTCGAG AACTTCGACA TCTTCCTGCG CAACGATGCG
GCGTGGGAGG CCGTCAATCG TCAAATCCTG GCCAAGCGCG ACACCGCTAC GCAGGCAACG
CCTTCGGGTG TCGGTCAGCT TCAGGCGGTC GTAACGGCGG AGATCAATTA TCAAAGGAAC
CTGTGGCAAA AGCATTACGA AGGCGCTGTC GAGAACGCAG GGCAAGTACT CGCGGCGCTC
ACGGATCCAT CATTGCAGGG CTACCGTGCC TTGTGGAATT ACCTGGCCGG TGCTGCGGCC
GCATACGGCG AAGGCGCCGG CGTTGGCGGC ATGAGCGCGC GTGCACGCAT ACACTTTGCC
GCCGCGCGCG ATGCGGCGGG CGCCATTCGG TGGCTTGCAT CACTCGCGCG TTATCGCGCC
GAGCTACCCA CAGTCTCTAC AGAGAACCAT GCCCTACAGG GACAGATTGA GCGCCTTGAA
ACGATGCTAC TAAAACTGGG CACAAAGCAT GAAGCGCGTT TTGCCCAAAG AGAAAAGACG
ATCCTTGACG GACTGAACTC TGCCGACACG ACTCAGTTTG AGATCGCGCA TAAGGACCTC
GGCGAAATGC TTGGGTTTGA CGCAGGCCAC CATGAATCGG ATGCGTCGCC CGATCCTTGG
TGGACGTCCG GCAAATATTG TCTGGTGTTC GAGGATCATT CAGGGGCTGA CCCAAAATCG
TCGCTCGGGG CTGACAAGGC GCGCCAGACC ACCGGACATC CGAAATGGAT GAAGGCGAAT
ACCACCATCA CGCACGTCAC AGAGCACACC GAGATTCTCT CGGTCCTGGT AACGCCTGTG
AAGAGGGCAG AGGCTGGCGC ATTCCCACAT CTCAGTGACG TTGCTTTGTG GCCGCTGGCT
GATTTCCGGG TTTGGGCCCG AGAGGCGCTG AACGTCGTGC GGCAGTTGCG GCGAACGATG
GGCGATGAAT GCAATCTCGC TTGGCGCGCA GAGGCACAGG CGGCTTTTGA GGAGAAGGGA
TACGATGCGG CAGGGCTTAT CAGATCCTTG GCTGGGTCCA ATGCAGCGAA GGGATTGAAG
AAATAG
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| Protein sequence | MWSLSIQRND HEHATLHEAL SNLFQPLLDA TDFGRLTGEI DDNLADAAWV EKLPTPAFAP
IAAEFVGIVD QHVGPIEDLR YTWRLLRDNL HACHVYLTPQ QIYVRPLIPP TWTHTPFTAA
RQRIYMSATL GEGGDLERLT GRQNITRLPV PPGWDRQGIG RRFFIFPEMT LDSDETDELR
QTLMQRVPRS VFLVPNDRTK DEVVREARSL GITTFDATAI EESKAGFVTA TGAAAVFANR
YDGIDFPGDE CRLLFLDGLP RTTNPQERFF VAKMGANALL QGRIQTRVVQ AVGRCTRSLQ
DYSAVVVTGS ELTDYLNSPA RLSFLHPELQ AELDFGARQS TSVSIADLVE NFDIFLRNDA
AWEAVNRQIL AKRDTATQAT PSGVGQLQAV VTAEINYQRN LWQKHYEGAV ENAGQVLAAL
TDPSLQGYRA LWNYLAGAAA AYGEGAGVGG MSARARIHFA AARDAAGAIR WLASLARYRA
ELPTVSTENH ALQGQIERLE TMLLKLGTKH EARFAQREKT ILDGLNSADT TQFEIAHKDL
GEMLGFDAGH HESDASPDPW WTSGKYCLVF EDHSGADPKS SLGADKARQT TGHPKWMKAN
TTITHVTEHT EILSVLVTPV KRAEAGAFPH LSDVALWPLA DFRVWAREAL NVVRQLRRTM
GDECNLAWRA EAQAAFEEKG YDAAGLIRSL AGSNAAKGLK K
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