Gene Nham_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1938 
Symbol 
ID4030541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2154867 
End bp2156159 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content65% 
IMG OID637970401 
Productchromate transporter 
Protein accessionYP_577203 
Protein GI92117474 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2059] Chromate transport protein ChrA 
TIGRFAM ID[TIGR00937] chromate transporter, chromate ion transporter (CHR) family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.275877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCTGG CCGACCCAGA AAATTGCCGC CATCGAATTC TAATTGGAGA GTGGACGTTT 
GTGAGCAACC TCAACTCCTC GAACGAAACA GGTACTGGAC GCGCGGCGAG GCTCGGTTCA
CCTCTGGAGG TACTCCGGAT TTTTCTTAAG CTCGGACTGT CCTGCTTCGG CGGCCCGATC
GCCCACATTG GTTACTTCCG CGATGAGTTC GTTGTGCGCC GGAAGTGGAT AGACGAACAT
GCCTTCGCCG ATCTCGTCGG GCTTTGCCAG CTCCTGCCGG GCCCCTCCAG CAGCCAGGTC
GGTTTCTCGA TCGGGCTGAT GCGGGCAGGC TATCTCGGCG CACTTGCCGC CTGGAGCGGC
TTCACCCTGC CATCGGCCGC TATCCTCGTC GTCTTCGCAT ATTCCGCCCG CGCCCTGAGC
GGATCGGTGG GCGCCGGGCT GCTGCATGGG CTGAGGCTGA CGGCGGTCGC TATCGTCGCG
CAAGCGGTTT GGGACATGGC GCGCAACCTC TGTCCCGACC TTGAGCGCGC GTCGATCGCC
GTGATGGTAA CACTTATCAT CCTGTCCTTT GCAACGTCAG TCGCCCAGAT TGGAGCGATC
GTGCTCGGCG GGCTCGCCGG TCTCTGGCTG TGTCGCAACG AAGCACAGAC TCCTTCGGGA
CAGGTCGATA GCCCGGTGTC GCGCAGTGTG GGACTGGTGG CCCTCGCCAT GTTCTTCCTC
CTGCTGGCGG TGCTTCCCGC ACTGCGTAGC CTGACGGTAT CCAGCAGCGT TGCCTTGTTT
GATGCCTCCT ACCGTTCCGG CGCACTCGTC TTCGGCGGCG GCCACGTCGT GCTCCCCTTT
CTGCGTGAAG CGTTCGTCGC GCCGGGCTGG TTGACCGACG ACGCCTTTCT TGCTGGCTAT
GGCGCCGCCC AGGCGGTGCC GGGCCCGCTA TTCACCTTTG CTGCCTATCT CGGCGCGGTG
GTCTCTCCGG AGCCGCACGG ACTTGCCGGT GCATCACTCG GCCTCATCGG TATCTTCCTG
CCGGGAATGC TAATCCTCCT TGGCGCGTTG CCGTTCTGGG ACTCGTTCCG TAAGCGCGTC
GGCGCCCAGG CCATGATGCG AGGCGTCAAC GCCGCGGTGG TCGGCGTGCT GGGCGCGGCC
CTCTACAATC CGGTGTGGAC CACGACGATC CACGCACCGG CCGACTTCGG CATCGCGCTG
GTTGGTTTCG TTCCGCTGAC CGTCTGGCGG GTGCCACCGC TCGTCGTCGT GGCTTTCAGC
GCCGCCGCTG GCGCGGCAGC AGCGTTCCTC TGA
 
Protein sequence
MVLADPENCR HRILIGEWTF VSNLNSSNET GTGRAARLGS PLEVLRIFLK LGLSCFGGPI 
AHIGYFRDEF VVRRKWIDEH AFADLVGLCQ LLPGPSSSQV GFSIGLMRAG YLGALAAWSG
FTLPSAAILV VFAYSARALS GSVGAGLLHG LRLTAVAIVA QAVWDMARNL CPDLERASIA
VMVTLIILSF ATSVAQIGAI VLGGLAGLWL CRNEAQTPSG QVDSPVSRSV GLVALAMFFL
LLAVLPALRS LTVSSSVALF DASYRSGALV FGGGHVVLPF LREAFVAPGW LTDDAFLAGY
GAAQAVPGPL FTFAAYLGAV VSPEPHGLAG ASLGLIGIFL PGMLILLGAL PFWDSFRKRV
GAQAMMRGVN AAVVGVLGAA LYNPVWTTTI HAPADFGIAL VGFVPLTVWR VPPLVVVAFS
AAAGAAAAFL