Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1922 |
Symbol | |
ID | 4030869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 2137283 |
End bp | 2138062 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637970388 |
Product | ABC transporter related |
Protein accession | YP_577190 |
Protein GI | 92117461 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATACAT CGGTTGGGGA GTTCGCAATT CAGGTCAACG ACCTCGTCGT GGGTTTCGGG CGCCGCGTCG TCATCAATCA TCTCGCGCTC GATGTACGCT GTGGCGAGAT CCTTGGCTTG GTCGGCGCGT CGGGCGGCGG TAAGTCGGTG CTGATGCGAA CCATCATCGG CCTGATCCCG CGAAGGGGCG GTGAGATCGA GGTGATGGGC GCCAAGATCG GCTCGACCCA TGATCGCGGA ACGCAGACGG TCGCCGGCAA ATGGGGCATC TTGTTCCAGC AGGGAGCGCT GTTCTCCTCG CTCACCGCGC GGCAGAATAT CCAGTTTCCG TTGCGCGAGA ATCTTGTGCT GTCAGATGCG CTGCTGGACG AGATTGCTAC AGCCAAGCTG GAAATGGTCG GCCTGACCCC GGAGGATGGC GACAAGTTTC CCTCCGAACT GTCGGGTGGC ATGACCAAGC GCGTGGCGCT GGCACGGGCG CTGGCGCTCG ACCCGGCGAT CGTTTTTCTC GACGAGCCGA CCTCCGGCCT CGATCCTATC GCGGCGGGCG ATTTCGATGC CCTGATCAAG ACATTGCAGA AAACCCTGGG CCTGACGGTG TTCATGGTGA CCCACGATCT TGCCAGTCTG AATACCATCT GCGACCGCGT CGCGGCGCTG GCGGACGGCA AAATTGTCGC CATCGGGCCG ATGCGGGAGC TGCTCCAATC CGAACACCCG TGGGTGCGGG CCTACTTCCA TGGCAAGCGC TCGTTGATGC TGCAACCGAA AGCGAGTTGA
|
Protein sequence | MDTSVGEFAI QVNDLVVGFG RRVVINHLAL DVRCGEILGL VGASGGGKSV LMRTIIGLIP RRGGEIEVMG AKIGSTHDRG TQTVAGKWGI LFQQGALFSS LTARQNIQFP LRENLVLSDA LLDEIATAKL EMVGLTPEDG DKFPSELSGG MTKRVALARA LALDPAIVFL DEPTSGLDPI AAGDFDALIK TLQKTLGLTV FMVTHDLASL NTICDRVAAL ADGKIVAIGP MRELLQSEHP WVRAYFHGKR SLMLQPKAS
|
| |