Gene Nham_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1922 
Symbol 
ID4030869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2137283 
End bp2138062 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content62% 
IMG OID637970388 
ProductABC transporter related 
Protein accessionYP_577190 
Protein GI92117461 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACAT CGGTTGGGGA GTTCGCAATT CAGGTCAACG ACCTCGTCGT GGGTTTCGGG 
CGCCGCGTCG TCATCAATCA TCTCGCGCTC GATGTACGCT GTGGCGAGAT CCTTGGCTTG
GTCGGCGCGT CGGGCGGCGG TAAGTCGGTG CTGATGCGAA CCATCATCGG CCTGATCCCG
CGAAGGGGCG GTGAGATCGA GGTGATGGGC GCCAAGATCG GCTCGACCCA TGATCGCGGA
ACGCAGACGG TCGCCGGCAA ATGGGGCATC TTGTTCCAGC AGGGAGCGCT GTTCTCCTCG
CTCACCGCGC GGCAGAATAT CCAGTTTCCG TTGCGCGAGA ATCTTGTGCT GTCAGATGCG
CTGCTGGACG AGATTGCTAC AGCCAAGCTG GAAATGGTCG GCCTGACCCC GGAGGATGGC
GACAAGTTTC CCTCCGAACT GTCGGGTGGC ATGACCAAGC GCGTGGCGCT GGCACGGGCG
CTGGCGCTCG ACCCGGCGAT CGTTTTTCTC GACGAGCCGA CCTCCGGCCT CGATCCTATC
GCGGCGGGCG ATTTCGATGC CCTGATCAAG ACATTGCAGA AAACCCTGGG CCTGACGGTG
TTCATGGTGA CCCACGATCT TGCCAGTCTG AATACCATCT GCGACCGCGT CGCGGCGCTG
GCGGACGGCA AAATTGTCGC CATCGGGCCG ATGCGGGAGC TGCTCCAATC CGAACACCCG
TGGGTGCGGG CCTACTTCCA TGGCAAGCGC TCGTTGATGC TGCAACCGAA AGCGAGTTGA
 
Protein sequence
MDTSVGEFAI QVNDLVVGFG RRVVINHLAL DVRCGEILGL VGASGGGKSV LMRTIIGLIP 
RRGGEIEVMG AKIGSTHDRG TQTVAGKWGI LFQQGALFSS LTARQNIQFP LRENLVLSDA
LLDEIATAKL EMVGLTPEDG DKFPSELSGG MTKRVALARA LALDPAIVFL DEPTSGLDPI
AAGDFDALIK TLQKTLGLTV FMVTHDLASL NTICDRVAAL ADGKIVAIGP MRELLQSEHP
WVRAYFHGKR SLMLQPKAS