Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1878 |
Symbol | |
ID | 4029582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 2091101 |
End bp | 2092819 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637970346 |
Product | sulphate transporter |
Protein accession | YP_577148 |
Protein GI | 92117419 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.536686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAGGTA TGGGACAGTC CCCGCTGTTC GCCTCCATGC GCGGCTGGAG CCGCAAGGAC CTGGGCGGTG ACGCCTTCGC CGGCCTGACA CTGGCTGCCA TTGCCATCCC CGAGCAGATG GCCACCGCAC ACCTCGGCGA TCTCTCCCCC GAAGCCGGCT TCCTCGCTTT CCTGACAGGC ACCGTAGCCT TCGCGCTGTT CGGCGCGAGC CGCCACATTT CCGTTGGGGC GGATTCCACC ATCACGCCGA TCTTCGCGGC GGGCCTCGTT ATTCTGGCCA CGTCTGGCTC GCCACATTAC CAAGCGCTGG CTGCACTACT CGCGCTGATG GTGGGAGCCG CAGTGTCGGC TGCCGGCCTG CTGCGGCTCG GTTGGGTCGC CGATCTGCTC TCGGTACCGG TCACCGCCGG CTTCCTTGCC GGAATATCGA TCCATATTGT TGTCTCGCAG CTTCCTGAGC TGCTCGGCCT GCCTCCCGGA AGCGGAGACG TCTTCCACCG CCTCGCAGCT GTCTATGGCG GCTTAAGTGA CATCAATCCC TATAGCGCCA CCATCGGCGC GGCCGTGTTC GCAGTCGTCG CTCTGTGCGA GCGCATCAGT GCGCGCATTC CCGGCGCGCT GATCGCGCTA ACGGCAGCCA CGCTGGCGGT GGTCGCCTTC GGTCTGCAGA CGCGCGGCGT CGCGGTCCTC GGCACACTGC CGGCCGCCTC GCCTGGCCTA CGCCTGCCGG AGGTGACGTT CGGGGACATG CGTACGCTGG TGCCGCTGAC CCTTCTGGTT ACTATCGTCA TCATGGTCCA GACGGCGGCC ACCACGCGTT CCTTCGGCGG CAGCAGCGCT TCGGACTCTA ACGACGTCAA CCGCGATTTC ATCGGCGTCG GCGCGGGCAG CCTGCTGTCC GGTCTCGTCG GCGCGTTCCC GGTCAATTCC AGCCCACCCC GCACCGCGAT CTCGGTCGAG ACGGGCGGTC GCTCGCAGGT CACCGGCTTG CTGGCTGCGG CCATCGTGCT GGCGCTTACG CTGTTCGGCA CAGACCTTTT GAAGAACGTG CCGCAGGCGG CGCTGGCGGG CATCCTGTTC TTCGTGGCTA TGCGTATATT GCGCTGGCAG ACCTTCATGG CAACGCTGCG CCAAGCGCCG ACGGAATTCT TGCTGATCGC CACCACCGCG CTCGCCATCG TGGCGCTGCC GATTGAGATC GGCGTCGCCA TCGGCATCGG CCTGTCACTC CTGCACGGCG TGTGGACCAT CACCCAAGCC AGGGCGATCG AGTTCGAGCA CGTGCCGGGC ACTTCCATAT GGTGGCCACC GGACGGTAAG CCGGCGGGCG AGCGGATCGC AGGCGTGCTG GTCGCAGCGT TCCAAGCGCC GCTGTCCTTC GTCAACGCAG ATCGCTTCCG CCAGGACTTC CACGCGATGG TGGGGGAGCG CGCGGGCAGC CTGAAGCACG TGGTGTTCGA GGCCAGCAGC GTCATCGACA TCGACTATAC AGCGGCGCAG ACCTTGCGCG AGGTGATCGC CTATTGCCGA GACGCCGGGA TTACCTTCTC GATCGCTCGG CTGGAATCGG TCAGAGCGCA GAAGGCGCTG GCGCGCTTCG GCATCGCCGC CATGCTGGGT CCAGCTGGGG TCTACCGCAG CGTCGATGAC GCCGTACGCG CCCTGACGCG TGGACAGGAC GCAGTTGCTG TGCCGCCAGC TGCCAACGGC AAGGAATGA
|
Protein sequence | MQGMGQSPLF ASMRGWSRKD LGGDAFAGLT LAAIAIPEQM ATAHLGDLSP EAGFLAFLTG TVAFALFGAS RHISVGADST ITPIFAAGLV ILATSGSPHY QALAALLALM VGAAVSAAGL LRLGWVADLL SVPVTAGFLA GISIHIVVSQ LPELLGLPPG SGDVFHRLAA VYGGLSDINP YSATIGAAVF AVVALCERIS ARIPGALIAL TAATLAVVAF GLQTRGVAVL GTLPAASPGL RLPEVTFGDM RTLVPLTLLV TIVIMVQTAA TTRSFGGSSA SDSNDVNRDF IGVGAGSLLS GLVGAFPVNS SPPRTAISVE TGGRSQVTGL LAAAIVLALT LFGTDLLKNV PQAALAGILF FVAMRILRWQ TFMATLRQAP TEFLLIATTA LAIVALPIEI GVAIGIGLSL LHGVWTITQA RAIEFEHVPG TSIWWPPDGK PAGERIAGVL VAAFQAPLSF VNADRFRQDF HAMVGERAGS LKHVVFEASS VIDIDYTAAQ TLREVIAYCR DAGITFSIAR LESVRAQKAL ARFGIAAMLG PAGVYRSVDD AVRALTRGQD AVAVPPAANG KE
|
| |