| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1850 |
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| Symbol | |
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| ID | 4033027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2059827 |
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| End bp | 2063045 |
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| Gene Length | 3219 bp |
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| Protein Length | 1072 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637970322 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_577124 |
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| Protein GI | 92117395 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.252043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTG ACGCCGTCCT TGCCTTTTCC ATCCGCCAGC GCTGGCTGAT GATGCTGCTC
GCGCTGGGGG TCGGCGTCTT CGGAGCCTGG AGTTTCACCC GGCTGCCGAT CGATGCCGTG
CCTGACATCA CGAATGTCCA GGTGCAGATC AATACGCGCG CGCCGGGCTA CTCTCCCTTG
GAAACCGAAC AGCGCATTAC GTTTCCGGTC GAGACGGCGA TGGGCGGTCT CCCGAAGCTT
GAATACACGC GATCGAGTTC GCGCTACGGC TTGAGCCAGG TCACGGTCGT CTTTCTCGAT
GGCACCGACA TCTACTTCGC GCGCCAGCTC GTCAACGAAC GCATCCAGCA GGTGAAGGAC
CAGTTGCCGG CCGGTGTCGA AGTCGCGATG GGTCCGATAT CGACCGGGCT CGGTGAAATC
TTCCTGTACA CCGTGGAGGC CAGGCAAGGC GCCAGGGCGC CCGGTGGTGG CGAATTCACG
CCGAGCGACC TGCGCACGAT CCAGGACTGG ATCATCAAGC CGCAACTGCG CACCGTCCCC
GGCGTGATCG AGGTCAACAC CATCGGCGGA TACGAACGCC AATTTCATGT ATTGCCGGAT
CCGGGGCGTC TGTTGGCCTA CAATCTCGGA TTTCGCGACG TGATGACGGC TCTCGCCGCC
AACAACGCCA ACGTCGGCGC GGGCTATATC GAACGCAACG GCGAGCAATA TCTCGTCCGG
ACTCCGGGGC AGGTCGCCAA CATCGCCGAG ATCCAGGACA TTGTCATCGG CTCGCGCGGG
GGCATTCCGG TCCGCATCCG CGATGTAGCC GAAGTGAAGG AAGGCAAGGA TCTCCGGACC
GGGGCGGCCA CGCTGGACGG CAAGGAGACC GTGCTTGGCA CGGCCATGCT GCTGATCGGA
GAAAACAGTC GCGCGGTCGC GAAAGGGGTT GCCGCCAAGC TCGGCGAGAT CGCCCGGTCG
CTTCCCGACG GCGTCATCGC GCGCACGGTC TACGACCGGA CGGACCTGGT CGATGCGACC
ATCAGAACCG TCCAGAAAAA CCTGATCGAG GGCGCGCTCC TCGTCATCGC TGTGCTGTTC
CTCATTCTCG GCAATATTCG CGCGGCCATC GTGACGGCGT GCGTGATCCC TCTCGCCATG
CTCTTCACCA TCACCGGCAT GGTCGAGGCA AAAGTCAGCG CAAACCTGAT GAGCCTCGGC
GCCATCGATT TCGGCATCAT CATCGACGGC GCGGTGATCA TCGTCGAGAA TTGTCTGCGG
CTTCTTGCTG AGGAGCAGCG CAGGAAAGGT GGGCTGCTGT CGCTCAAGGA ACGCCTGCGG
ACGATTCTCG ACGGGTCACG CGAGGTGATC AAACCCAGCC TGTTCGGCAC CATGATCATC
GCGGTCGTGT ATCTGCCGGT ACTGACGCTC ACCGGCGTCG AAGGAAAGAT GTTCACGCCG
ATGGCGCTCA CCGTGCTGAT GGCGTTGCTG GGCGCCGCCA TCTTCTCCGT GACGTTCGTT
CCTGCGGCGG TCGCGATCGT GGTTACCGGC AAGGTCTCCG AGAAGGAGAA CATCTTCATG
CATGGGGCCA AGCGGGTCTA TCTGCCGCTG CTGAAAGGTG CGATCCGGTA TAGGCATTGG
GTGGCGTCGG GGGCTGTCGT CGTCGTGCTT GCAAGCGGCT TCGCCGCGAC CCGCATGGGC
GGCGAATTCA TTCCGTCTCT CGACGAGGGG GACATCGCCA TCGCTGCGAT CCGGATACCG
GGGACCAGCC TGACCCAGTC GCTCGATCTC CAGATGGCGC TGGAAAAACG GATCAGGAAA
ATTCCGGAGG TGAAGGATTT TTTTGCGCGG ACCGGTACCG CCGAGGTTGC CACCGATGCG
ATGCCGCCAT CGATCTCGGA CGGTTACGTC ATGCTCAAGC CGCGCGAGGA ATGGCCCGAT
CCGTCGAAGC CGAAATCCGA ACTGGTGGAG GAGATCGAGC ACGCTGCGAA CGAGATTCCC
GGCAGCAACT ACGAAATCTC GCAACCGATC CAGTTGCGGG TCAACGAACT GATTTCGGGT
GTGCGCAGCG ACCTTGGCAT CAAGATATTC GGCGACGATC TGGATATTCT CCAGGGCGCC
GCGAAACAGG TGCAGGCCGC GATTACAAGC ATCCCGGGCG CGACCGACGT GAAGACCGAG
CAGGTGTCCG GACTGCCAAT TCTGACGGTC AAGCTCGACC GCCGGGCGCT GTCGCGCTAC
GGCCTGAGCA CTGCAGATGT CCAGAACGTC GTGGAGATTG CGATCGGCGG CAAAAGCGCC
GGCAAGCTGT TCGAGGGCGA TCGGCGCTTC GATATCGTGG TCCGTCTCCC CGAAAACCTT
CGGGGCCGTC TGGATTCGAT CCGCGCCATC TCCATCCCGC TGCCTCCCGT CGAAAACGCG
GCGGCGGAAA CGACGAAGGT CGCATGGTCG GATTCGTCCG CGGTGCAGAT GCGGTACGTG
CCGCTGTCGT CGGTAGCGAC CATCGATATC GCGCCGGGTC CCAACCAGAT CAGCCGCGAA
AACGGCAAGC GTCGCATCGT CGTCACCGCC AATGTCCGCG AGCGGGACCT CGGATCGTTC
GTAGCCGACG CGCAGGAGGC GGTCGCGGAG AAAGTCAAAC TGCCGCCGGG TTACTGGATC
GGCTGGGGAG GGCAGTTCGA GCAGCTCGTT TCGGCAACCA GACGCTTGAC CATCGTGGTG
CCGGTTGCGC TCGCGCTCGT GCTGCTGCTG TTGTTCATGA GCTTCGGATC GGTCGCCGAT
GCGCTGTTGG TGTTCAGCGG CGTGCCGCTG GCTCTGACCG GCGGCGTTCT GGCGCTGCTA
TTGCGCGGCA TCCCGCTGTC CATCAGCGCC GGTGTTGGAT TCATCGCGCT GTCCGGCGTC
GCGGTTCTGA ACGGCATCGT CATCATCGCC TTCATCGAAC GGCTGCGGCG GGAGGGCAAG
CCGGTGTTCG ACGCCGTGTA TCAGGGCGCA TCGACCCGGC TAAGACCGGT CCTGATGACG
GCGCTCGTCG CCTCCCTCGG ATTCGTTCCG ATGGCCCTCG CGACCGGCGC CGGCGCGGAG
GTGCAGCGGC CATTGGCGAC AGTCGTGATC GGCGGCATCG TTTCGTCGAC TATCCTGACG
CTGCTGGTGT TGCCGGCGCT ATATATCCTG TTCCGGAAAG ACTCCGTGCC GGCGCACGAT
CTGTCCGCAG AGGAAACGTT TCCAGGAATG GCCGGGTAG
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| Protein sequence | MNIDAVLAFS IRQRWLMMLL ALGVGVFGAW SFTRLPIDAV PDITNVQVQI NTRAPGYSPL
ETEQRITFPV ETAMGGLPKL EYTRSSSRYG LSQVTVVFLD GTDIYFARQL VNERIQQVKD
QLPAGVEVAM GPISTGLGEI FLYTVEARQG ARAPGGGEFT PSDLRTIQDW IIKPQLRTVP
GVIEVNTIGG YERQFHVLPD PGRLLAYNLG FRDVMTALAA NNANVGAGYI ERNGEQYLVR
TPGQVANIAE IQDIVIGSRG GIPVRIRDVA EVKEGKDLRT GAATLDGKET VLGTAMLLIG
ENSRAVAKGV AAKLGEIARS LPDGVIARTV YDRTDLVDAT IRTVQKNLIE GALLVIAVLF
LILGNIRAAI VTACVIPLAM LFTITGMVEA KVSANLMSLG AIDFGIIIDG AVIIVENCLR
LLAEEQRRKG GLLSLKERLR TILDGSREVI KPSLFGTMII AVVYLPVLTL TGVEGKMFTP
MALTVLMALL GAAIFSVTFV PAAVAIVVTG KVSEKENIFM HGAKRVYLPL LKGAIRYRHW
VASGAVVVVL ASGFAATRMG GEFIPSLDEG DIAIAAIRIP GTSLTQSLDL QMALEKRIRK
IPEVKDFFAR TGTAEVATDA MPPSISDGYV MLKPREEWPD PSKPKSELVE EIEHAANEIP
GSNYEISQPI QLRVNELISG VRSDLGIKIF GDDLDILQGA AKQVQAAITS IPGATDVKTE
QVSGLPILTV KLDRRALSRY GLSTADVQNV VEIAIGGKSA GKLFEGDRRF DIVVRLPENL
RGRLDSIRAI SIPLPPVENA AAETTKVAWS DSSAVQMRYV PLSSVATIDI APGPNQISRE
NGKRRIVVTA NVRERDLGSF VADAQEAVAE KVKLPPGYWI GWGGQFEQLV SATRRLTIVV
PVALALVLLL LFMSFGSVAD ALLVFSGVPL ALTGGVLALL LRGIPLSISA GVGFIALSGV
AVLNGIVIIA FIERLRREGK PVFDAVYQGA STRLRPVLMT ALVASLGFVP MALATGAGAE
VQRPLATVVI GGIVSSTILT LLVLPALYIL FRKDSVPAHD LSAEETFPGM AG
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