Gene Nham_1827 details

Gene Information

• Locus tag: Nham_1827
• ID: 4033004
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 2034213
• End bp: 2034917
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637970299
• Product: hypothetical protein
• Protein accession: YP_577101
• Protein GI: 92117372
• COG category: [S] Function unknown
• COG ID: [COG3827] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACAAC CTGCAACGGT CCAAGAACCC TCGATGGAGG AGATACTGGC GTCGATCCGC 
CGCATCATCG CCGACGACGA AAAGCCCGCG GCGGCTGGAA GGGCAGCGAT CGCCGACGCC 
GCGATTGCAA AACCCCAACT CACCACATCC GCCTCTCAGC CGGCCCCGCC CACGAGGCCG 
GCCGCCATGA CCGCCAGCCC TCCGTCCACG GTCGCGCCGA AGCCGGCCGC CGACAACAGT 
CAGGACGACA TCGATGCGTT GCTGGCGAAC CTCGACGCCG CAACTACCGA GGAGGAGGTC 
CGCCCGGCCC AGGCTGACGA GGTGTTTGAA CTGACGGACG AGATGGCCCT TCCTCATCCG 
GAGAAGGCGG CTTTCCAGAA AGTCGAGCCG CAGGACGATC TGGAATTCGC CGAGATGGCG 
TCGGCCCCGG CTACCCGGCC GCGTCCGGCC GCCGTCGATC GGCCAGCCGT TCCGAATGCC 
GTGCCGGCCG CGCAAATTCT GTCGCATTCG ACGGTTTCGG CGGTCGAGAC CGCGTTCAAT 
TCGCTCGCCA GCACGGTTTT GAGTAACAAC GCCCGCACTC TTGAGGACCT CGTCAAGGAG 
ATGCTGCGCC CGATGCTGAA GTCCTGGCTC GACGACAACC TGCCGGGGCT GGTCGAGCGC 
ATCGTCAAGG CCGAAATCGA GCGGGTGTCG CGCGGGCGCT CGTGA 

 

Protein sequence

MTQPATVQEP SMEEILASIR RIIADDEKPA AAGRAAIADA AIAKPQLTTS ASQPAPPTRP 
AAMTASPPST VAPKPAADNS QDDIDALLAN LDAATTEEEV RPAQADEVFE LTDEMALPHP 
EKAAFQKVEP QDDLEFAEMA SAPATRPRPA AVDRPAVPNA VPAAQILSHS TVSAVETAFN 
SLASTVLSNN ARTLEDLVKE MLRPMLKSWL DDNLPGLVER IVKAEIERVS RGRS