| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1802 |
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| Symbol | |
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| ID | 4032979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2003295 |
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| End bp | 2004158 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637970274 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_577076 |
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| Protein GI | 92117347 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.283074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGTG CGGCATCGGA GAATTCGTCC GCGGCGTTCT GTGCAGACCT CGTGCGCAAC
CACGATTTCG AAAACTATGC GACGACGCTG CTCGCGCCGC TCCGTTGCCG CCGCGCGCTG
CTGGCGCTTT ATGCTTTCAA CGTCGAGATC GTCAGGGTCA GGGAGCAGAT CACCCAGCCA
TTGCCGGGCG AAATCCGTCT GCAATGGTGG CTGGACGTGC TCGTGGGCGC GGGACACGGC
GGCGTTGAAG GCAACCCGGT CGCCGCCGAA CTGCTGCTGG CGATCCGGGA CCATGGTCTG
CCGGTCGAGC GGTTGTCGCG ACTGATCGAG GCGCATCAGT TCGATCTCTA CAACGATCCG
ATGCCGGACC TGGCGGCGTT GGAGCAATAT CTCTTTGATA CATCGTGCGC GTTGTTTTCG
TTTGCCTCGT GTATCGTCGG ACACCAATCC GATAAGACGG ATCATCTGGC GCGTCACGCG
GGTCTTGCGC GCGGTATCGC GCAGGTGATT GCGATGCTGG GTTTCGACGC GTCGCGGCGT
CAGTCGTACG TGCCGCTGCA ATTGATGGAG CAACATGGCA GCGCTCTGGA ACAGGTGTTC
GCGGGGCGGG ACACACCACC GCTTCGCGCA GCCCTCAGCG GACTGGCCGA TGAAGCACGA
TCGCATCTGG ATGCGGCGCT GGCTCTGCTG CCGGAGCTGC CGCCGGAGTC GCGGACGGTG
TATCTCCCGC TCGCGCTGGT GCGCCCCGCA TTGAAACGCA TGGCTCAAGC CAACGTCGAT
CCCTTCGTGC CGCAGGCTGC ATCGCGGTTG CACATCTTGT GGACGTTGTG GCGGGCGTCA
CGCACGACGA TGTTTCGTGC CTGA
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| Protein sequence | MSGAASENSS AAFCADLVRN HDFENYATTL LAPLRCRRAL LALYAFNVEI VRVREQITQP
LPGEIRLQWW LDVLVGAGHG GVEGNPVAAE LLLAIRDHGL PVERLSRLIE AHQFDLYNDP
MPDLAALEQY LFDTSCALFS FASCIVGHQS DKTDHLARHA GLARGIAQVI AMLGFDASRR
QSYVPLQLME QHGSALEQVF AGRDTPPLRA ALSGLADEAR SHLDAALALL PELPPESRTV
YLPLALVRPA LKRMAQANVD PFVPQAASRL HILWTLWRAS RTTMFRA
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