Gene Nham_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1794 
Symbol 
ID4032971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1994916 
End bp1995569 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content68% 
IMG OID637970266 
Productprotein-L-isoaspartate O-methyltransferase 
Protein accessionYP_577068 
Protein GI92117339 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCCCG CCGGTCCGCC GCCGCCCGAG AAGATGATGT TTCAGCTCAG CCTGCGGCGA 
CGCGGCATCA GCGATCAGCG CGTCCTGCGC GCGATGGACA GCGTCCCGCG CGATGTCTTC
GTGGAGTCGG ACGATCGCGA CGATGCCTGG CGGGATACCG CGCTCGGCAT CGCCTGCGGC
CAGACCATCA GCCAGCCTTT CGTCGTCGCC TACATGACCG AGCGGCTGGA ATTGCGCGAC
GACCACCGGG TGTTGGAGAT CGGCACCGGC TCCGGCTATC AGGCCGCGAT CCTGTCGCGT
CTGTGCCGCG AGGTCGTGAC CATCGAACGG TTTCGCGTGC TCGCCGATCG CGCCCGCGCC
CGGCTGGAGC AGCTCGATTG CGATAACGTC GAGGTCATGC TGGGCGACGG ATTCGACATT
CCAGCCGGGG CGGGGCAGTT CGACCGCATC ATGGTGACGG CGGCGATGGA GCAGATTCCG
GACGCGCTGA CGGCCCGGAT CGAGCCCGAC GGGCTTCTGA TCGCGCCCGT CGGCCCGCAC
AACGGACGGC AGACGCTGAT GCTCCTCCGG CGGACCAACG CCGGACTTGT CCGCAAGGAG
CTGATCGACG TCCGCTTCGT GCCGGCGCTG CCGGGCATCG CCCGCGAACT TTAG
 
Protein sequence
MSPAGPPPPE KMMFQLSLRR RGISDQRVLR AMDSVPRDVF VESDDRDDAW RDTALGIACG 
QTISQPFVVA YMTERLELRD DHRVLEIGTG SGYQAAILSR LCREVVTIER FRVLADRARA
RLEQLDCDNV EVMLGDGFDI PAGAGQFDRI MVTAAMEQIP DALTARIEPD GLLIAPVGPH
NGRQTLMLLR RTNAGLVRKE LIDVRFVPAL PGIAREL