Gene Nham_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1787 
Symbol 
ID4032964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1989034 
End bp1989699 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content63% 
IMG OID637970259 
Productprotein-L-isoaspartate(D-aspartate) O-methyltransferase 
Protein accessionYP_577061 
Protein GI92117332 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGACT TTTCGACCGC TCGCGGAAAA ATGGTTGATG GTCAGGTGCG CCCCAGCGAC 
GTCACCGATC TTAGAATCAT CGACGCCATG CTGGCGCTGC CGCGTGAGGT TTTCGTTCCC
GAAGATCGCC GGGCGCTGGC TTACCTGGAT CTCGATCTGG ACGTCAGCGA AAAGGGCGCG
CCGAAGCGGT ATCTGATCAA GCCCATGGTC GTCGCAAAGA TGATGCAGGC TGCCGACATC
AAGAGCACCG ACAACGTCCT CGTGGTGGGC TGCGCAACCG GATACTCTGC GGCGCTGGCG
GCGAAACTCG CGGATCGGGT GACGGCGACC GAAAGCGACC CGGCCCTGGC GGCGAAAGCG
GCCGGCATTC TTGCGACGCT CGGCCTCGGC CATGTGACCG TCGTCACCGC CGCGGCGTCC
AAAGGAGCGC CCGTCAATGC GCCCTATGAC GTTATTATTC TGGAGGGCGC GACCGAGGTC
GTTCCGGACC TGCTCAACCG GCAGCTCGGC GCCGAAGGGC GTCTGGTCGG CGTGTTCGCC
ATGAGCCGCG CGCAACGGGC GGTCATCGTC ACGCATTCGC ATTCCGATTT CGGACACAGA
GATCTCTTCG ATGCGTCGGT CCCGGTCTTG CCCGGGCTGG AGCGGCCGGC AGCTTTTATT
TTTTAA
 
Protein sequence
MSDFSTARGK MVDGQVRPSD VTDLRIIDAM LALPREVFVP EDRRALAYLD LDLDVSEKGA 
PKRYLIKPMV VAKMMQAADI KSTDNVLVVG CATGYSAALA AKLADRVTAT ESDPALAAKA
AGILATLGLG HVTVVTAAAS KGAPVNAPYD VIILEGATEV VPDLLNRQLG AEGRLVGVFA
MSRAQRAVIV THSHSDFGHR DLFDASVPVL PGLERPAAFI F