| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1675 |
|---|
| Symbol | |
|---|
| ID | 4032928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 1873425 |
|---|
| End bp | 1874300 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637970148 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_576952 |
|---|
| Protein GI | 92117223 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.315344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCA ATCTGCAGGC CCTCTCCGCG CAGCTTCTGG TCGGGCTGAT CAACGGCTCG
TTCTATGCGC TGCTCAGTCT CGGCCTCGCC GTGATCTTCG GCATGCTCAA CATCATCAAT
TTCGCGCATG GCGCGGTCTA TATGATGGGC GCGTTCTGCG CCTATTTCCT GCTCAACGTC
TTTGGGATCG GCTACTGGCC GGCGCTGATC GTTGCACCGG TTCTCGTGGG CATCTTCGGC
ATGGTCATGG AGCGGACCAT GCTGAAATGG CTGACCGGGC TGGATCATCT GTATGGACTG
CTGTTGACCT TCGGTCTCGC GCTGATCATT CAGGGCGTGT TCCAGAACTA TTTCGGTTCA
TCCGGTCTGC CCTATGCCAT TCCCGACGAA TTGCAGGGCG GCATCAATCT CGGCTTCATG
TTTCTGCCGG TCTACCGCGG TTGGGTGATC GTATGCTCGC TGGTGGTCTG CATCGCCACC
TGGTACCTGA TCGAGCGGAC CCGGCTCGGC GCCTATTTGC GCGCGGCGAC TGAAAATCCC
ACACTGGTGC GCGCGTTCGG CATCAACGTG CCGCGTATGA TCACGCTGAC CTACGGGTTA
GGCGTCGGCC TCGCGGCGCT GGCCGGCGTG CTGTCGGCGC CGATCAATCA GGTGCGGCCG
CTGATGGGCG CGGACCTGAT CATCGTGGTG TTCGCGGTGG TGGTGATCGG CGGCATGGGA
TCGATCATGG GATCGATCAT CACGGGATTT GCGCTCGGCA TCATCGAGGG ACTGACGAAG
TATTTTTATC CCGAGGCCTC CAATTCCGTG GTTTTCGTGC TCATGGTGCT GGTGCTGCTG
GTGAAGCCAA CGGGGTTGAC GGGACGGGCG ACCTGA
|
|---|
| Protein sequence | MSINLQALSA QLLVGLINGS FYALLSLGLA VIFGMLNIIN FAHGAVYMMG AFCAYFLLNV
FGIGYWPALI VAPVLVGIFG MVMERTMLKW LTGLDHLYGL LLTFGLALII QGVFQNYFGS
SGLPYAIPDE LQGGINLGFM FLPVYRGWVI VCSLVVCIAT WYLIERTRLG AYLRAATENP
TLVRAFGINV PRMITLTYGL GVGLAALAGV LSAPINQVRP LMGADLIIVV FAVVVIGGMG
SIMGSIITGF ALGIIEGLTK YFYPEASNSV VFVLMVLVLL VKPTGLTGRA T
|
|---|
| |