| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1565 |
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| Symbol | secY |
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| ID | 4033139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1768659 |
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| End bp | 1769990 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637970041 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_576847 |
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| Protein GI | 92117118 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.112443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTCAG CAGCGGAACA ATTGGCGGCG AACCTTAACT TCTCCGCGTT CGCGAAAGCC
GACGAACTGA AGAAGCGCAT CTGGTTCACG CTGGGCGCGT TGCTCGTCTA TCGGCTCGGC
ACCTACATCC CGCTGCCGGG CATCGACCCC ACGGTTTGGC AGAAGGTTTT CAACTCCCAG
GCCGGCGGCA TCCTCGGGAT GTTCAACATG TTCTCCGGCG GTGGTATCGA CCGCATGGCG
ATCTTCGCCT TGAACATCAT GCCGTACATC TCGGCAGCGA TCATCCTGCA ACTGTTGACC
TCCGTGTCGC CTAAGCTTGA GGCCCTCAAG AAGGAGGGTG AAGCCGGCCG CAAGGTGATC
AATCAATACA CGCGCTATCT CACCGTGGTG CTGGCGTTCT TCCAGTCCTA CGGCATCGCC
GTCGGCCTCC AGGGCGCCGG CAACGTCGTT ACCAATCCCG GCATGTTCTT CCTGGTCTCG
ACCGCAATCA CGCTGACCGG CGGCACCATG TTCCTGATGT GGCTTGGCGA GCAGATTACC
TCGCGCGGCA TCGGAAACGG CATTTCGCTC ATCATCATGG CGGGCATCGT CGCCGAGTTG
CCGTCGGCGC TCGCCAACAT GCTGGAGCTC GGCCGTCAGG GTGCGCTGTC GACCGGGATC
ATCCTGATCG TTCTGATCAT GGTCGTGGGC GTCATCGCCT TTATCGTGTT CATGGAGCGC
GCCCAGCGCA GGTTGCTGAT CCAGTATCCG AAGCGCCAGG TCGGCAACAA GATGTTCGAG
GGGCAGTCCT CGCATCTGCC GCTGAAACTC AATACCTCGG GCGTGATTCC GCCGATCTTC
GCGTCGTCGC TGCTGCTGCT GCCGACGACC GTCGCGAACT TCAACGCAGG CAAGGGACCG
GAATGGTTCC AGTGGGTGAA CACGCAACTC GGCCACGGCC GGCCGATGTT TCTGATCCTC
TACATCGCGC TGATCGTGTT CTTCACCTTC TTCTACACCG CGATTGTTTT CAATCCGACC
GAGACCGCCG ACAATCTGAA AAAGCACGGC GGCTTCATTC CGGGCATCAG GCCGGGCGAG
CGAACCGCCG AATATATCGA CTACGTGCTC TCGCGTATCA CCGTGCCGGG GGCGGCGTAT
CTCGCGGTTG TCTGCCTTAT TCCTGAGATT CTGATTTCCT ACGCGGCCGT GCCGTTCTAT
TTCGGCGGTA CATCGCTGTT GATCGTCGTC AGCGTGACGA TGGATACGGT GCAGCAGGTG
CAGGGATATC TGCTGGCCCA TCAGTATGAA GGACTGATCA AAAAGTCCAA GCTGAGGGGC
CGCCGTCGAT GA
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| Protein sequence | MASAAEQLAA NLNFSAFAKA DELKKRIWFT LGALLVYRLG TYIPLPGIDP TVWQKVFNSQ
AGGILGMFNM FSGGGIDRMA IFALNIMPYI SAAIILQLLT SVSPKLEALK KEGEAGRKVI
NQYTRYLTVV LAFFQSYGIA VGLQGAGNVV TNPGMFFLVS TAITLTGGTM FLMWLGEQIT
SRGIGNGISL IIMAGIVAEL PSALANMLEL GRQGALSTGI ILIVLIMVVG VIAFIVFMER
AQRRLLIQYP KRQVGNKMFE GQSSHLPLKL NTSGVIPPIF ASSLLLLPTT VANFNAGKGP
EWFQWVNTQL GHGRPMFLIL YIALIVFFTF FYTAIVFNPT ETADNLKKHG GFIPGIRPGE
RTAEYIDYVL SRITVPGAAY LAVVCLIPEI LISYAAVPFY FGGTSLLIVV SVTMDTVQQV
QGYLLAHQYE GLIKKSKLRG RRR
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