Gene Nham_1533 details

Gene Information

• Locus tag: Nham_1533
• ID: 4032626
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 1744927
• End bp: 1746975
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637970009
• Product: amine oxidase
• Protein accession: YP_576815
• Protein GI: 92117086
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1232] Protoporphyrinogen oxidase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.799563
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGATC TAGCAATTGT TGGCGGTGGC CCTGGCGGGC TGATGAGCGC ATGGCACCTC 
AGGAAAAAAC TCGGAGAACT GTGTCGCGTT ACCATCTTTG AAGCTTCCGA CCGCCTCGGC 
GGCAAGCTGC TGACCCACAA GTTCGAGACC GCACCGGCGA TGTACGAGGC GGGAGTTGCG 
GAAATCTACG ACTACTCGGC GACAGGGCCG GATCCGCTCC GCGAACTGAT CCAGCATTTC 
GGATTGCAGA CGATTCCGAT GGACGCCGGG CAGGTGCAGC TCGACGGCGA GCTGCTCGAC 
GACGTTTCCG GCATGCGTCG CAAATACGGC GCGGGGACCG CCGATGCCAT CGTAGCCTTC 
CGCAAGCGCT GCACCGAGAT GATATCGCCG ATCGAGTATT ACGAAGGCGC GCGCGGCAAC 
GAGCACCCAT GGGCGTTCAT GACGGCGGAG GAGCTGCTCG ACAAGGAGGT CGCGGACCCG 
GTCGCCAGGC GCTTCTTCAA GGTGATGGCG CGCTCCGATA TTGCCACCGA GAGCCACAAC 
ACCAACGGGC TGAACGCGCT CAAGAACTTC GTGATGGATG TGGACGGTTA TATCGGCCTG 
TATTCGATCC AGAACGGCAA CGAACAGTTG ATCGACTGCC TGAGGGCCGA GGTCGATGCC 
GACATCCAGC TCAATCACCG CGTTCTCAAG GTCGGCAAGA CACCGGCCGG CCGTTACCAA 
CTCGACATGA TGAACGGCAA GGGACCGGAG ACCCGCGACT TCGATCTCGT CATCATGTGT 
CTGCCCCATA GCTGGCTTGC GACCATGGGA TGGGATGGCG AGCAATTGCG CAAGTCGATG 
GTCAAGCATG TCGCTTACTT CGACCGGCCG GCGCATTACC TTCGCGTTTC GATCCTGTTC 
GACGAGCCGT TCTGGGGCGA GAAGATTTCG GGCGCATGGT TCATGTCCGA AGCCTTCGGC 
GGCTGCTGCG TCTACAACGA GGGCGCGCGG CACGACGTCG GCCGCCACGG CGTGCTGAAC 
TGGCTGATCG CCGGCTCCGA CGCGCTGGCG TTCGCCAACC TCAGCGACAA GGAGTTGATC 
GATGCGGCGC TGAAGTCGCT GCCGGCGTCG CTCGGCAATG CGCGCGCGCA TGTCCTCGAA 
GGCAAGATCC ATCGCTGGAT GTCGGCGGTC AACGCGATAC CCGGAGGCCT TCCGGCGCGC 
GACGTCATGA CCAACCACCG GCCCGAGCCG AAGGCGCATC CGGGCCTGGT CGTTGTCGGC 
GACTATCTGT TTGATTCAAC CCTCAATGGG CTGCTGGATT CGTCGGATGC GGCGACCGAC 
ATCATTGTCA CCGAGATGAT GAAGCTGCGC CGTGCGCGTG ACGAGAGTCG CGCAATCGCC 
TTCAGCCCGA TCGACCGCGA TTACTTCGAG AACTATCGCG GCCTCGGTCC ATATCGCGAG 
GTCTGGCAGC AGTTCAGCGA TCCGGACTTT CTGATGAATC TGATCGGGAT CGCGTGGAAC 
AGGACGACGA ACTACAAGCT GCTGGTAGCG GGATCCGCAA GCGGCGAACT GGTCGGCGCG 
CTGCGCGCCC GTGGCATCGA CGCCTGGGGC ATCGAGAACA ACCGCGCCAT TCATGCGATG 
ACGCCGCCGG CGCTGCAGGC GTTCAACCGT TTCGGCTCGA TCGTCGATAT GCCGTTCGAG 
GACGGGCAGT TCGATTTCGT CTATGAAACC AGTCTCTGCC ATGTCTCGGA ATCCCGGACG 
CGGCGTGCGG TTCGCGAGTT GAACCGCGTC GTCAAGACCG GACTGATCTT CGGATCCGTC 
ACCAGCGACA TGAAGCCGGC GTTGATCGAC CTTTACGATT TGCAGCGCGG CGTGAAGAAG 
CTCGGCACCT GGTGGGAGTG GTCGGAAATC TTTTTCAATA ACGGTTTCGA CCTCGCCATG 
AACCGCAACG ACCGTACCGA CGAATTGTGG GCGGCGGCCA TCGCAGCCAA CAAGGGACCG 
GATCGGTGGT ACGCGGATGC CGAGAGCCTG CGTTACTCGC TGTTCGACAA GGTCGAGGGC 
AGTGACTGA 

 

Protein sequence

MLDLAIVGGG PGGLMSAWHL RKKLGELCRV TIFEASDRLG GKLLTHKFET APAMYEAGVA 
EIYDYSATGP DPLRELIQHF GLQTIPMDAG QVQLDGELLD DVSGMRRKYG AGTADAIVAF 
RKRCTEMISP IEYYEGARGN EHPWAFMTAE ELLDKEVADP VARRFFKVMA RSDIATESHN 
TNGLNALKNF VMDVDGYIGL YSIQNGNEQL IDCLRAEVDA DIQLNHRVLK VGKTPAGRYQ 
LDMMNGKGPE TRDFDLVIMC LPHSWLATMG WDGEQLRKSM VKHVAYFDRP AHYLRVSILF 
DEPFWGEKIS GAWFMSEAFG GCCVYNEGAR HDVGRHGVLN WLIAGSDALA FANLSDKELI 
DAALKSLPAS LGNARAHVLE GKIHRWMSAV NAIPGGLPAR DVMTNHRPEP KAHPGLVVVG 
DYLFDSTLNG LLDSSDAATD IIVTEMMKLR RARDESRAIA FSPIDRDYFE NYRGLGPYRE 
VWQQFSDPDF LMNLIGIAWN RTTNYKLLVA GSASGELVGA LRARGIDAWG IENNRAIHAM 
TPPALQAFNR FGSIVDMPFE DGQFDFVYET SLCHVSESRT RRAVRELNRV VKTGLIFGSV 
TSDMKPALID LYDLQRGVKK LGTWWEWSEI FFNNGFDLAM NRNDRTDELW AAAIAANKGP 
DRWYADAESL RYSLFDKVEG SD