| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1439 |
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| Symbol | |
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| ID | 4033299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1621769 |
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| End bp | 1623751 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637969913 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_576721 |
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| Protein GI | 92116992 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.612264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCCG AGGTCGGACA TTATGCGCTG GTGCTGGCGC TTGGTCTTGC GTTGATCCAG
TCCACGGTGC CGATCATCGG CGCGAGACTG CACGACGGCG CGCTGATGAA CGTGGCGCGC
TCGACCGCGC TTGCGCAATT GCTGTTCGTC GGCGTTTCGT TCCTCGCGCT GGTGACGCTG
CACGTCATTT CCGACTTCTC GGTCGTCAAC GTGTTCGAGA ATTCCCATTC GCTGAAGCCG
ATGCTCTACA AGATCACCGG CGTCTGGGGC AATCACGAAG GCTCCATGCT GTTGTGGGTG
ACGATCCTCG CGCTGTTCGG CGGGCTGGTC GCCGCGTTCG GCAGTAACCT TCCGCTGTCG
CTGCGCGCCC ATGTGCTGGC GGTGCAGGGC TGGATCGCGA CCGCGTTCTA TCTGTTCATC
CTGCTGACGT CGAATCCGTT CATGCGGCTC GTCAGCCCGC CGCTGGAAGG CCGCGACCTC
AATCCGGTGC TGCAGGATAT CGGGCTCGCG GTGCATCCGC CGATGCTCTA TCTCGGCTAT
GTCGGATTCT CGATCTCGTT CTCCTTCGCC GTCGCCGCTC TAATCGAAGG CCGCATCGAT
GCCGCCTGGG CGCGCTGGGT GCGGCCGTGG ACGCTGATGG CGTGGATTTT CCTGACGCTT
GGAATCGCGA TGGGGTCGTA CTGGGCCTAT TACGAACTCG GCTGGGGCGG CTGGTGGTTC
TGGGATCCGG TCGAGAACGC ATCGCTGATG CCGTGGCTGG CCGGAACGGC GCTGCTGCAT
TCCTCGGTGG TGATGGAAAA GCGCAACGCG TTGCGGGTAT GGACCATCCT GCTTGCGATC
CTGACCTTCT CGCTGTCGCT GCTCGGCACC TTCCTGGTGC GCTCAGGCGT GCTGACATCG
GTCCATGCCT TCGCCACCGA TCCGACGCGC GGCGTCTTCA TTCTGCTGAT CCTGTGCACC
TTCATCGGTG GCAGCCTGTC CTTGTATATC TGGCGTGCCT CCGCTCTGAA GCAGGGCGGG
TTGTTCGCGC CGATCTCGCG CGAGGGCGCG CTCGTGCTCA ACAACCTGTT CCTGACCACG
GCCTGCGCCA CCGTCTTCAT CGGGACGCTG TATCCGCTGG CGCTCGAGGT CATCACCGGC
ACAAGGATTT CGGTCGGCGC GCCGTTCTTC AACCTGACAT TCGCTCCCTT GTTCGTCCCG
CTGCTGATCG CGGTGCCGTT CGGCCCGCTG CTGGCGTGGA AGCGCGGCGA TCTGGCCGGC
GCCTCGCAAC GGTTGATGGC CGCCGGGATC GGCGGCATCA TCGCGGTGGC CGTGCTGTGG
GCATGGACGC GCGGCGGCAG CACCTTCGCG CCGCTGGCGA TCGGACTCGC CGTGTTCGTG
ATTCTCGGCG CGCTGAGCGA TCTCGCCGGG CGCATCAACC TGTTTCATGC GTCGCTTCCG
GTGTCGTTCC GCCGCGCTAA GGGGCTGCCG CGTTCGGCCT GGGGCACCGT TTTCGCCCAT
GCCGGCCTCG GCGTGGCCCT GATCGGCATC GTCTGCGAAA CCACCTGGAA CACAGAATAC
ATCGCCTCCA TGAAGCAGAA CGACGTGGCG CAGGTCGGCG GTTACAGCCT GACCTTCGAC
GGCACGACGC AGCGGGAGCG ATCCAACTTC CGGGAACAGA TTGCACGCTT CACCGTGAGC
AAGGACGGGC AGCCGATCGC GGTGATGACG CCGTCGAAGC GCAACTTCAC CACGCGCGCG
GCATCGACCA CGGAAGCCGC GCTGCTGACG CGAGGTGCGA GCCAGCTCTA TATCTCGCTC
GGCGATACCG CCGCCGATGG GGCGGTCGCG GTGCGCATCT ACCACAAGCC GATGGTGCTG
TTGATCTGGT TCGGGCCGGT TCTGATGGCC TTTGGCGGCG TGCTGTCGCT GTCCGACCGT
CGTCTGCGGG TTGGCGCGCC GAAACCGGCG AAGGCCAGCC ACATACTCCA GCCGGCGGAG
TGA
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| Protein sequence | MIAEVGHYAL VLALGLALIQ STVPIIGARL HDGALMNVAR STALAQLLFV GVSFLALVTL
HVISDFSVVN VFENSHSLKP MLYKITGVWG NHEGSMLLWV TILALFGGLV AAFGSNLPLS
LRAHVLAVQG WIATAFYLFI LLTSNPFMRL VSPPLEGRDL NPVLQDIGLA VHPPMLYLGY
VGFSISFSFA VAALIEGRID AAWARWVRPW TLMAWIFLTL GIAMGSYWAY YELGWGGWWF
WDPVENASLM PWLAGTALLH SSVVMEKRNA LRVWTILLAI LTFSLSLLGT FLVRSGVLTS
VHAFATDPTR GVFILLILCT FIGGSLSLYI WRASALKQGG LFAPISREGA LVLNNLFLTT
ACATVFIGTL YPLALEVITG TRISVGAPFF NLTFAPLFVP LLIAVPFGPL LAWKRGDLAG
ASQRLMAAGI GGIIAVAVLW AWTRGGSTFA PLAIGLAVFV ILGALSDLAG RINLFHASLP
VSFRRAKGLP RSAWGTVFAH AGLGVALIGI VCETTWNTEY IASMKQNDVA QVGGYSLTFD
GTTQRERSNF REQIARFTVS KDGQPIAVMT PSKRNFTTRA ASTTEAALLT RGASQLYISL
GDTAADGAVA VRIYHKPMVL LIWFGPVLMA FGGVLSLSDR RLRVGAPKPA KASHILQPAE
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