Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1422 |
Symbol | |
ID | 4033282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1603835 |
End bp | 1604419 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637969896 |
Product | gene transfer agent (GTA) like protein |
Protein accession | YP_576704 |
Protein GI | 92116975 |
COG category | [S] Function unknown |
COG ID | [COG5281] Phage-related minor tail protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGACG ACACGAGCCT GCAGGACGCA TCGAGCACGC TCGACAGTAT CACCGCAAAA ACTCAGGCGC TGACGATCAG CGCGGGCGGC TTTGCGCGGG CGATGACGCA GGCGTTTTCC TCGTCGATCA ACGGCGGCAA GCAATTCGAC GACGTGCTGA AAACGCTGGC GCTGCGGGTC TCGAGCCTCG CGGTGACCGC CGCGTTCAAG CCGCTGACGG CGAGCCTGAC CAGCGGCATC TCCAGCCTGT TCTCGGGTCT CACCGGAAGC GCGGGCGCGG CCGCGGGCGT GCAGGCCAAC GCGCTCGGCG CCATCAAGCC GTTCGCATCG GGCGGCGTGA TCGGCACGCC CAGCTATTTT CCGATGATGG ACGGCGGCGT CGGCCTCGCC GGCGAGGCAG GTCCGGAGGC GATCATGCCG CTGGTGCGCG GTGCCGACGG CCGGCTCGGC GTCTCCGGCA ATGGCGGCGG CAACAGCATC ACGGTGCAGA TCGCGACCCC CGATCTCGAC AGTTTCCGTC GCTCGGAGAG CTACGTCACC GGTCAGATCG CGCGCGCGGT GGCGCGGGGG CAGCGGAGTC TCTAG
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Protein sequence | MTDDTSLQDA SSTLDSITAK TQALTISAGG FARAMTQAFS SSINGGKQFD DVLKTLALRV SSLAVTAAFK PLTASLTSGI SSLFSGLTGS AGAAAGVQAN ALGAIKPFAS GGVIGTPSYF PMMDGGVGLA GEAGPEAIMP LVRGADGRLG VSGNGGGNSI TVQIATPDLD SFRRSESYVT GQIARAVARG QRSL
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