Gene Nham_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1394 
SymbolfliE 
ID4031885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1579137 
End bp1579448 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content65% 
IMG OID637969868 
Productflagellar hook-basal body protein FliE 
Protein accessionYP_576676 
Protein GI92116947 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.190515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCGC CCACCGTCGC AGCAAACGCC TATGCGAGCC TCGCGAAGAT GATGGATTCC 
GGCACCGCCG CCGGCAAGGC GTCGGAGGGC GGCGGCCCGT CGTTCAGTTC GGTGTTGAAG
GATGCGCTCG GCAGCGTGAT GGAAGCCGGG CGGAAGTCCG ATGCGCAGAC CGTGGCGATG
GCGTCGGGCA AGGCCAATGT GATGGATGTG GTGACGGCGG TGGCGGATAC CGACGTCGCG
GTGTCGACGC TGGTGTCGGT GCGCGACCGC GTCATCCAGT CCTACGAAGA CATCATGAGG
ATGCCGATCT GA
 
Protein sequence
MASPTVAANA YASLAKMMDS GTAAGKASEG GGPSFSSVLK DALGSVMEAG RKSDAQTVAM 
ASGKANVMDV VTAVADTDVA VSTLVSVRDR VIQSYEDIMR MPI