Gene Nham_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1379 
Symbol 
ID4031850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1563752 
End bp1564852 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content63% 
IMG OID637969854 
Producttransposase, mutator type 
Protein accessionYP_576662 
Protein GI92116933 
COG category[L] Replication, recombination and repair 
COG ID[COG3328] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGAC GCAAAGACCC TGCGATACCA AATGATCTTC TCGACCAGCT TCTGGCGGGA 
GGCGCAGCCA GTGCAGCCTT CGAACAGGGC GGCCTGCTGG ATTCGCTCAA GAAGGCTCTG
ACCGAGCGCG CGCTAAACGC GGAGATGGAC CATCATCTGG CGAGCGGCGA AGACGCTGGC
AATACGCGTA ACGGCTACGG CCGCAAGACC GTGACGACGG AGACCGGCAA GCTGGAGATC
GACATACCGC GCGATCGCCA GTCGAGTTTC GATCCGCAGT TGATTGCCAA GTATCAGCGC
CGTTTTCCCG GCTTCGACGA CAAGATCGTG TCCATGTATG CGCGCGGCAT GAGCACCCGG
GAGATCACCG GGCACCTGCG CGATCTGTAC GGTATCGAGG TGTCGCCGGA CCTGATCTCA
ACGGTGACGG ACGCCGTTCT CGACGAAGTC GCCACCTGGC AGCAAAGACC ACTCGATCCG
GTTTATCCGC TGATCTTCTT CGATGCGATC CGGGTCAAGA TCCGCGACGA AGGGATGGTC
CGCAACAAGG CCATCCACAT CGCGCTGGGG GTCCGCGCCG ACGGCGCCAA GGAGGTGCTC
GGCCTGTGGC TCGAGCAGAA CGAAGGCGCC AAATTCTGGC TGCGGGTGAT GAACGAGCTC
AAGAACCGCG GCGTCGATGA TATCCTGCTG GCCGTCGTTG ATGGCCTGAA GGGCTTCCCC
GATGCGATCA CCGCTGTGTT CCCGGAGGCG GTCGTCCAGA CGTGCATCGT CCACCTGCTG
CGCAACTCCA TGGACTTCGT GTCCTGGAAA GACCGCAAGG GGCTGGCGAC AGCGCTCAAG
GACATCTACC GCGCCGTCGA TGCCGATGCT GCCGAAAAGG CGCTGGCGGC GTTCGAGGCC
GGCCCCTGGG GCCAGCGCTA CCCCGCCATC GGCCAGAGCT GGCGGCGCGC CTGGGGCGAG
GTCATCCCGT TCTTTGCCTT CCCTGACGAG GTGCGTCGGA TCGTCTACAC AACGGATGAG
ATCGACAAGC AGTTTCTTTC CGGTCGTGAT ATTATTTTGC TGCGTGGGCG ACCTCGTGGC
GGAGCGCGGT GCATCGGCTG A
 
Protein sequence
MARRKDPAIP NDLLDQLLAG GAASAAFEQG GLLDSLKKAL TERALNAEMD HHLASGEDAG 
NTRNGYGRKT VTTETGKLEI DIPRDRQSSF DPQLIAKYQR RFPGFDDKIV SMYARGMSTR
EITGHLRDLY GIEVSPDLIS TVTDAVLDEV ATWQQRPLDP VYPLIFFDAI RVKIRDEGMV
RNKAIHIALG VRADGAKEVL GLWLEQNEGA KFWLRVMNEL KNRGVDDILL AVVDGLKGFP
DAITAVFPEA VVQTCIVHLL RNSMDFVSWK DRKGLATALK DIYRAVDADA AEKALAAFEA
GPWGQRYPAI GQSWRRAWGE VIPFFAFPDE VRRIVYTTDE IDKQFLSGRD IILLRGRPRG
GARCIG