| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1237 |
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| Symbol | |
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| ID | 4032231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1394894 |
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| End bp | 1395577 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637969716 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_576525 |
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| Protein GI | 92116796 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA CACCGAAAGC GCCCACCTCC ACGGCCGCGA AACGCAAGGC GAGCCGCCGC
AAGGCCGCAC CTGCCGCGCG GCTGGCGGCG CTCTCACCCA AGCGCCAAAC GGTACAACGT
GACGTCGCGG CCGACGCCAG AGGCGCCATC CGCCGCCTCA AATCCCAGCT CGCGGCGGCG
CAGGAACGGA TCGCGGATCT TGAGGCCTTC GCGGAGACCG ATTTTCTTCT GGGCGTCCTC
AATCGCCGCG GCTTCGAACG CGAACTTCGC CGCTCGGTCG CCTATATCCG GCGTTATCAT
GCGAGTGGTG CGCTGTTCGT GCTCGACGTC GATCGTCTGA AGCCCATCAA CGACGCTCTC
GGTCACGCGG CGGGAGACGC GGTGCTGAAG GCCGTGGTTG CGGCGCTGTC TCGACACGTG
CGATCCTCCG ACCTGATCGG GCGGCTCGGC GGCGACGAGT TCGCGCTGCT GTTGTGGAAT
CTCAGCGAGA CCGACGCCAA AGCCAAGGCG TCGGTGCTCG AAGAGACCAT CGACCGGCTG
ACATTGACTT TCCGCGGGCG GCCGATCACG GCCGGCGCAT CGATCGGAGT CGCGATCCTC
GGACCGCACG CCGACGCCGG CACGGCGTTG GAGCAGGCCG ACTGCGCAAT GTACGTCCGC
AAGGCGCAGC GGCGGGGCGA TTGA
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| Protein sequence | MKKTPKAPTS TAAKRKASRR KAAPAARLAA LSPKRQTVQR DVAADARGAI RRLKSQLAAA
QERIADLEAF AETDFLLGVL NRRGFERELR RSVAYIRRYH ASGALFVLDV DRLKPINDAL
GHAAGDAVLK AVVAALSRHV RSSDLIGRLG GDEFALLLWN LSETDAKAKA SVLEETIDRL
TLTFRGRPIT AGASIGVAIL GPHADAGTAL EQADCAMYVR KAQRRGD
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