Gene Nham_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1165 
Symbol 
ID4032565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1323570 
End bp1324643 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content55% 
IMG OID637969659 
Productsignal transduction histidine kinase 
Protein accessionYP_576468 
Protein GI92116739 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACAAA TGTACGAGCA CCCAGAGATA AGCCTGTGCG GCTGCGGGGA CGGATTTTTC 
GTGTTTCGTT GGCTGCTCAG AGTGTTCCGC GAGCGCGCCA GTCGTTTACA GGCAGCGGCT
CAGTGTAGAC TAAGGCCATC CTGGGGAGGC GTGGCCGTTG TCGCTCTCTT CGTCATAGCC
GGCGCCTTGA CGTTTGATGC GTTGACCCAG CGGATAATCT CGGTCGACAT TTTTTATGTA
GGTCTGGTCC TCCTGGGTTT CTGGCTTCCC AAACCCAAGG CAGCTCTTGC TCTTGCGCTG
CTCGCAACGA CTCTGATCAT CGCGGGATAT TGGATATCGA TCGCTGAAAG CATACCGGCG
TGGCAGGAAT GGCTAAATCG GACTCTCGCC ATTGGGGTTG TTTGGCTTGC GGCAGTCTTC
GTCTGTCGTA TCCGTATCCT TGAAGAAAGC TTGCAGCGAC AGATGGATAT CACCAAAGCG
CTTTCGCGCG AAATGAATCA TCGTGTGGGA AATCAGCTGC AGCTCGTTTC TTCGTTCTTG
ATGCGCCAAG CCAGCAGCAA CTGCAATGAA GAGGTGGGCC GCGCGCTCGA ACGCGCGGGC
TCACGTGTGA TGGTGATTGG AAATATTCAG CGGCTGTTGT CGCATTGTAC ACCTTCGGCC
ACGATTGACT CGAGAGAGTT TATCATGACG GTCATTGACG ATGTGCGCTC GATTTTGCCA
AACTCCGATC GGGTTGACAT AGCGGTCCAT GCCGATTCCG CGGAGCTAAC CTCCATGCGC
GCAATCGCCC TCGGGACCTT GTTGGTTGAA CTCATCAACA ATGCGCTGAA ATATGCGTTT
TCCGAGGGTA TGAAGGGGAT GCTCACCGTG AATTTCACTG TTTCAGGGAA CAAGAACATA
ATCGAGTTTA AGGACGACGG TGTCGGCATT GCTCACGGAC ATACCCCCGA CGGCTTTGGC
ACCAAGAATG TAGAGGACCT CGCACGCCTG TTGGGAGGGT CGATAACCTG TCAAGCCGCA
TGTCAGTCAG ACAGCCGGCC GGGCGCCAAA TGGCGGCTGG TCATCCCGGC ATGA
 
Protein sequence
MPQMYEHPEI SLCGCGDGFF VFRWLLRVFR ERASRLQAAA QCRLRPSWGG VAVVALFVIA 
GALTFDALTQ RIISVDIFYV GLVLLGFWLP KPKAALALAL LATTLIIAGY WISIAESIPA
WQEWLNRTLA IGVVWLAAVF VCRIRILEES LQRQMDITKA LSREMNHRVG NQLQLVSSFL
MRQASSNCNE EVGRALERAG SRVMVIGNIQ RLLSHCTPSA TIDSREFIMT VIDDVRSILP
NSDRVDIAVH ADSAELTSMR AIALGTLLVE LINNALKYAF SEGMKGMLTV NFTVSGNKNI
IEFKDDGVGI AHGHTPDGFG TKNVEDLARL LGGSITCQAA CQSDSRPGAK WRLVIPA