Gene Nham_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1040 
Symbol 
ID4031646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1161678 
End bp1162694 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content62% 
IMG OID637969538 
Productmolybdopterin dehydrogenase, FAD-binding 
Protein accessionYP_576348 
Protein GI92116619 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAATT TCCAGTACTC GCGCGCAACC GACGTTGCTG ACGCCCTGAG TCAGATCGCG 
GCCGATGCCT CGGCAAAGTT CATTGCCGGC GGCACCAATC TCGTCGACCT GATGAAATAC
GACGTCGAGC GCCCCGGCCG GCTGATCGAC ATTTCGCACC TTCCGCTAGC CAAGGTCGAG
GAAACGACCG GCGGCGGTCT GCGCATCGGC GCACTGGTGC CGAATTCCGA CCTCGCCTGG
CATCCACTGG TGATGGAACG CTATCCGCTG CTGTCGAGCG CCATCCTCGC CGGCGCCTCG
GCCCAACTGC GCAACATGGC GTCCACCGGC GGCAACCTGC TGCAGCGGAC CCGATGCTTC
TATTTCTATG ATGTCGCGAC ACCATGCAAC AAGCGCGAGC CCGGTTCCGG CTGTTCGGCA
AAAGACGGTA TCAACCGGAT CAACGCCATC CTCGGCACCA GCGATGCCTG CATCGCCACC
CATCCCTCCG ACATGTGCGT CGCGCTGGCG GCGCTCGATG CCAAGGTGCA TATCGCCGGC
CCCGACGGTG AGCGCGCCAT TGCCATGGCG GATTTCCATC GCCTGCCCGG CGACACGCCA
CAGCGTGATA CCAATCTCGA TCCGAAAGAA ATCATCACGG CCATCGAACT GCCAGCGCAG
CGCTTCAACA AGCACTACAC CTATCTGAAG ATCCGGGATC GTTTGTCCTA TGCCTTCGCG
CTGGTCTCGG TCGCGGCCGC GCTCGAGATC GATAGCGGCA CAATCCACGA TGCGCGGCTG
GCGCTCGGCG GTGTGGCCCA CAAGCCGTGG CGGAATCCGG AAGCCGAAGC AGCCTTGATC
GGACAGCCCG CCACTCACGA CACCTTCGCT CGCGCGGCCG ACATCGTTCT GCACGAGGCT
AAGGGTTTCG GCCACAATAC CTTCAAGATC GACCTCGCTC GGCGCGTCAT CGTTCGCGGG
TTGACGCAAG CCGCGAACGG CACACCGCAA TCGCAATCTA ATAAGACAAT CGCATGA
 
Protein sequence
MNNFQYSRAT DVADALSQIA ADASAKFIAG GTNLVDLMKY DVERPGRLID ISHLPLAKVE 
ETTGGGLRIG ALVPNSDLAW HPLVMERYPL LSSAILAGAS AQLRNMASTG GNLLQRTRCF
YFYDVATPCN KREPGSGCSA KDGINRINAI LGTSDACIAT HPSDMCVALA ALDAKVHIAG
PDGERAIAMA DFHRLPGDTP QRDTNLDPKE IITAIELPAQ RFNKHYTYLK IRDRLSYAFA
LVSVAAALEI DSGTIHDARL ALGGVAHKPW RNPEAEAALI GQPATHDTFA RAADIVLHEA
KGFGHNTFKI DLARRVIVRG LTQAANGTPQ SQSNKTIA