Gene Nham_1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1027 
Symbol 
ID4032370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1148813 
End bp1149976 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content59% 
IMG OID637969525 
Producthypothetical protein 
Protein accessionYP_576335 
Protein GI92116606 
COG category[S] Function unknown 
COG ID[COG3146] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGC ACATTCCGGC CCCTGATTCC CTTTCGGTCG CACCGATCAG CCGCGACGAA 
TTGCGAACCT GTGAGGCGTG GCGGACTGCC TTCGCCGACC GGCGCAAGGA TCACCGCTAC
TACGAGATCA TTGCGGACAC GATCCGCGAT CGCTTCGAGT ATGGTTATTT CGCGATCCGC
GATGCGTCAG GCCGGGTGCT GGCGGTGCAG CCATATTTTC TGCTCGACCA GGATGTCCTG
GAAGGCGTCA AGCTCGATGG TTGGTCGCTC GTCGCAAGCA TCCGCCGCCG CTATCCACGT
TTCCTGAAAC TGCGCACACT GATGCTCGGC TGCACGGCAG GCGAAGGGCA TCTCGCGACC
AGCGCGCACC TTTCGTCCAC GGCCATCGCC ATGGCCTTGG CGCAAGGTAT CGTTGCCCAG
GCGCGTGCGT TGGGTGCGCA GATGATTGTG CTCAAGGAAT TTCCGCGCGG CGATCGTCGC
GATCTTGCGT GTTTCGAGCG CGAAGGGTTC GGTCGCGCGC CGAGCATGCC GATGACCATA
CTCGACATCG ACTATGACAG TTTCGATGAC TACATGCAGA AAGCATTAAG CGCGAAGACG
CGCCGTCATC TGCGCAAGAA ATTCCTCGGC ACTGAAAACT CCGGTCTCGC CATGACGGTG
GCCGATAATG CGGCGAGCTT CATCGACGAG CTCTATCCGC TCTATTTGCA GACCTACGAG
CACTCGAACT TTCATTTCGA GAAACTGACC AGGGATTACT TCCGCCGTCT CGGCTGCGAG
ATGAGCGACA AGACCCGCTT CTTCATCTGG GATCGCGGCA ATACCCTGAT GGCGTTCGCT
CTATGCATGG TCGAGGGCGA CGATATCTTT GCCGAGTATA TCGGCCTCGA TTACGACTTC
GCGTTCGACC TCCATCTCTA TCACTACATT ACGCGCGACA TGATCAGCTG GGCGATGGCC
CATGGCTACA AGCGCTTCCG CAGCAGCGGG CTGAATTACG ATCCCAAGCT GCACCTGCGC
CATCGGCTCG ATCCCATTGA TCTTTATGTG CGGCTTGTCT CGCCGTTCGC CAACCGGATC
CTGCGGTTGG TGCTGCCATG GATCGTCCCG GTGCGCTACG ACGCGACATT GCGGAAGTTT
TCCGACTATC ATGAGATGTG GTGA
 
Protein sequence
MEQHIPAPDS LSVAPISRDE LRTCEAWRTA FADRRKDHRY YEIIADTIRD RFEYGYFAIR 
DASGRVLAVQ PYFLLDQDVL EGVKLDGWSL VASIRRRYPR FLKLRTLMLG CTAGEGHLAT
SAHLSSTAIA MALAQGIVAQ ARALGAQMIV LKEFPRGDRR DLACFEREGF GRAPSMPMTI
LDIDYDSFDD YMQKALSAKT RRHLRKKFLG TENSGLAMTV ADNAASFIDE LYPLYLQTYE
HSNFHFEKLT RDYFRRLGCE MSDKTRFFIW DRGNTLMAFA LCMVEGDDIF AEYIGLDYDF
AFDLHLYHYI TRDMISWAMA HGYKRFRSSG LNYDPKLHLR HRLDPIDLYV RLVSPFANRI
LRLVLPWIVP VRYDATLRKF SDYHEMW