Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0976 |
Symbol | |
ID | 4031814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 1080634 |
End bp | 1082583 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637969478 |
Product | putative serine protein kinase, PrkA |
Protein accession | YP_576288 |
Protein GI | 92116559 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2766] Putative Ser protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAGCG AGCAGTCTGA CGTCTTCGAA TTGTTCTCTA AAATCTATAG CTCCGTGGCC CCGGAAGAGA TGAGCCTCCA GCAATATCTA CTGGCGTGTC GGGAGGACAA GTCGATGTAT GGTTTGGCGC CCGAGCGCAT GGTCGACGCG ATCGGCGAAC CCAAGCTGGT CGACACTAGC AAGGACGAGA GGCTCGGCCG CATTTTCGCG AATAAGACGA TCAAGCTTTA TTCGGCCTTC TCCGAGTTCT ATGGCATGGA AGACACGATC GAGCGGATCG CCGGCTATTT CCGCTATGCT TCGCAGGGGC TGGAGGAGCG CAAGCAGATC CTCTACTTGC TCGGCCCGGT TGGCGGCGGC AAATCTTCGC TGGCAGAGCG ACTGAAAAGC CTGATGGAGC AGCGCCCCAT CTATACCCTC AAGGCCGGGA ATCAAATTAG CCCGGTTTTT GAATCGCCGC TCGGCCTTTT CAGCCCTGAC CGCATGGCCG ATTTGCTGGA AGACAAATAC GGGATCGCGC GGCGACGCTT AAACGGCCTA ATCTCACCTT GGGCGGCGAA ACGTCTTGAT GAACTGGCCG GTGATATTTC CAAGTTTTCC GTTGTAAAGC TTATGCCGTC CCGGCTTCGC CAGATCGGCA TCGCCAAGAC CGAGCCTGGT GACGAAAACA ACCAGGACGT CTCTGCGCTG GTCGGCAAGG TCGACATCCG CCAGCTCGAG AACTACAGCC AGTCCGATCC GGATGCCTAT TCCTACAGCG GCGGCCTGAA CCGCACCACA CAGGGCCTGC TGGAGTTCGT CGAGATGTTC AAGGCACCTA TCAAGGTGCT GCACCCGCTG CTCACGGCAA CGCAAGAGGG CAGCTACAAC GGCACCGAGA ATTTCGGATC ATTTCCATAC CAGGGAATAG TCGTGGCCCA TTCCAACGAA TCGGAATGGC TGCAGTTCAA GAACAACAAG AACAACGAGG CGTTTCTTGA CCGCATCCTG GTGGTCAAGG TGCCATATTG CTTGCGGATT ACCGAGGAAA GGCAAATCTA TGATAAGCTG CTGCGCGAAA GCGAGCTTGT CGACAGCACC TGCGCGCCGG AGGTCCTGGA CATCCTCAGC CGGTTCACGG TTTCAACCCG TTTGGCTGAA CATGGCAACT CGCCCCTCTA CACCAAGATG CGGATCTATG ACGGCGAAAA CCTTAAGGAC GTCGACCCCA AGGCAAAGTC GGTCCAGGAG TATCGGGACG CTGCCGGCGT CAATGAGGGC ATGACCGGCG TCAGCACCCG TTTTGCTTTC AAGATCCTGT CGCAGACCTT CAACTATGAT ACCGAAGAAG TCGCTGCCGA CCCCGTTCAT CTGATGTATA TTTTAGAAGA TGCCATTAAG CGCGAACAGT TTCCGAAAAA GGCGGAATCC GCCTATCTCG ATTTCATAAA GTCTGAGCTC GCCACCCGGT ACGCCGAGTT TATCGGCCAT GAGATTCAAA AGGCCTATCT CGAATCCTAC AGCGAATACG GCCAGAACCT GTTCGACCGC TATATTGCCT ATGCCGATGC CTGGATCGAA GACCAGGACT ACAAGGATCC CGATACCGGT CAGATCCTCA ACCGCGAGGT GCTGGACAAC GATTTGTCGC AAGTCGAAAA ACCGGCCGGC ATAGCCAACC CGAAGGACTT CCGCAACGAG GTGGTGAAGT TTACGCTGCG GGCGCGGGCC CGCAATGACG GCCGCAACCC GTCATGGACG AGCTACGAGA AGCTGCGCGA GGTGATCGAG AAGCGCATGT TCGGCCAGGT CGAGGATCTG CTGCCCGTGA TCAGCTTCGG CTCCAAGCAG GACAACGTCA CCGAGAAACG CCACCACGAA TTCGTGCAGC GGATGATCGC GCGCGGCTAT ACCGAGCGCC AGGTGCGGCG GCTGGTGGAC TGGTACATGC GGGTCAACAA GGCCGGTTGA
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Protein sequence | MHSEQSDVFE LFSKIYSSVA PEEMSLQQYL LACREDKSMY GLAPERMVDA IGEPKLVDTS KDERLGRIFA NKTIKLYSAF SEFYGMEDTI ERIAGYFRYA SQGLEERKQI LYLLGPVGGG KSSLAERLKS LMEQRPIYTL KAGNQISPVF ESPLGLFSPD RMADLLEDKY GIARRRLNGL ISPWAAKRLD ELAGDISKFS VVKLMPSRLR QIGIAKTEPG DENNQDVSAL VGKVDIRQLE NYSQSDPDAY SYSGGLNRTT QGLLEFVEMF KAPIKVLHPL LTATQEGSYN GTENFGSFPY QGIVVAHSNE SEWLQFKNNK NNEAFLDRIL VVKVPYCLRI TEERQIYDKL LRESELVDST CAPEVLDILS RFTVSTRLAE HGNSPLYTKM RIYDGENLKD VDPKAKSVQE YRDAAGVNEG MTGVSTRFAF KILSQTFNYD TEEVAADPVH LMYILEDAIK REQFPKKAES AYLDFIKSEL ATRYAEFIGH EIQKAYLESY SEYGQNLFDR YIAYADAWIE DQDYKDPDTG QILNREVLDN DLSQVEKPAG IANPKDFRNE VVKFTLRARA RNDGRNPSWT SYEKLREVIE KRMFGQVEDL LPVISFGSKQ DNVTEKRHHE FVQRMIARGY TERQVRRLVD WYMRVNKAG
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