Gene Nham_0752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0752 
Symbol 
ID4031436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp832368 
End bp833444 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content64% 
IMG OID637969283 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_576094 
Protein GI92116365 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCATC CAATTCCGGA AGTGCTGGAG GCTTTTGCCA ACGGCGAAAT CGTCGCCGTC 
ACCGATGATG ACGACCGCGA GGGCGAGGGC GATCTGATCG TCGCGGCATC GCTCTGCACC 
GCGGAGAAGA TGGCGTTCAT CATACGACAC ACCTCCGGCA TCGTTTGCGC GCCGATCACG 
ACGGAGGAGG CGCTCCGGCT GCGGCTCGAT CCGATGGTCG CGCATAACGA GTCCAATCAT 
ACCACGGCCT TCACCGTCTC GATCGATTAC AAGCCCGATG GCGGCACCGG CATTTCGGCC 
GAAGAGCGTG CCTCCTGTTG CCGGGCACTC GCCAATCCCA ACGCCGGCGC CAGCGACTTT 
GCCCGGCCCG GCCACATCTT CCCGCTGATC GCGCGCAACG GCGGTGTCCT GTTGCGCGCA 
GGCCATACCG AGGCGGCGGT CGATCTCTGC AAGCTGGCTG GCCTGCCGCC GGTCGGTGTC 
ATCAGCGAAT TGATGAACGA CGACGGCACG GTGATGAAAG GCGAGCAGGT GGCGCGGTTC 
GTTGCCGCGC ACGGCCTCAA GCATGTGACC ATCGCCGATA TCATCGCGTA TCGTCAGGCG 
CGAGAGAAGC TGATTGAACG GGTCTCGGAG TTTACGATCG ACAGCCCGAT CGGACCGCTG 
CAGGGTTACG CCTACCGTTC GCCGTTCGAT TCCATCGCCC ACGTCGCGTT CGTCTATAAC 
GGCATCGGCG ACGGCAGGGA TGTCCTGACC CGTTTCCACA AACCCGATAT CGTGCGCGAT 
ATCTTCGCCG GGCCGCGGCG CATGGAGGTC GTGCTCGAGC ATTTCGAGAA GGCCGGCAGC 
GGCGTGCTGG TGTGTCTGCG CGACGGTGCC GCCGGGGTGC CGGTGGCGCC GCTCCCCGAA 
CACAAATCGG CGGAAGCCGA CCGCAACAGG CAGTGGCGCG AGGTCGGCGT CGGCGCGCAG 
ATCCTGCGCG ATCTCGGCGT GACCTCGATC CGGCATCTGA CCTCGTCCGC ATACGACTAC 
AAGGGCCTCT CCGGTTTCGG CATCGAGATC GCCTCCAACG AGCATCTTGA AAGCTGA
 
Protein sequence
MSHPIPEVLE AFANGEIVAV TDDDDREGEG DLIVAASLCT AEKMAFIIRH TSGIVCAPIT 
TEEALRLRLD PMVAHNESNH TTAFTVSIDY KPDGGTGISA EERASCCRAL ANPNAGASDF 
ARPGHIFPLI ARNGGVLLRA GHTEAAVDLC KLAGLPPVGV ISELMNDDGT VMKGEQVARF 
VAAHGLKHVT IADIIAYRQA REKLIERVSE FTIDSPIGPL QGYAYRSPFD SIAHVAFVYN 
GIGDGRDVLT RFHKPDIVRD IFAGPRRMEV VLEHFEKAGS GVLVCLRDGA AGVPVAPLPE 
HKSAEADRNR QWREVGVGAQ ILRDLGVTSI RHLTSSAYDY KGLSGFGIEI ASNEHLES