| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0644 |
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| Symbol | |
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| ID | 4031223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 706114 |
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| End bp | 707997 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637969175 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_575992 |
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| Protein GI | 92116263 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.770181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACCGC CGCCCAAAGC CCGGGCGACG CGCGGTTTTC CCGATGAAGA AGAAACCAGT
CCCATGAACC TCCGCAACAT CGCCATCATC GCCCACGTCG ACCATGGCAA GACCACCCTC
GTGGATCGCC TGCTCCAGCA GTCCGGCACC TACCGCGACA ATCAACGCGT GGTCGAGCGC
GCCATGGACT CGAACGACAT CGAGCGTGAG CGCGGCATCA CCATTCTCGC CAAGTGCACG
TCGGTCGAGT GGGCAGACAC GCGCATCAAC ATCGTCGATA CGCCGGGCCA CGCCGATTTC
GGCGGCGAGG TCGAGCGTAT CCTGTCGATG GTGGACGGCG TGATCGTGCT CGTCGACGCC
GCCGAAGGCC CGATGCCGCA GACCAAATTC GTCGTCGGCA AGGCGCTGAA GCTTGGTCTC
AAGCCGATCG TCGCCATCAA CAAGGTCGAC CGCCCCGACG CGCGCGTCAT CGAAGTCGTC
AATGAAGTCT TCGACCTGTT CGCAGCGCTC GATGCCACCG ACGACCAGCT CGATTTCCCG
ATTCTTTATG GCTCCGGCAA GAACGGCTGG ATGGGCGCCA CCGTCGAGGA CAACGACAAG
GGAATGAGGC CGCTGTTCGA TCTCGTTATC AAGCATGTTG CGCCGCCGGT CGTTGAAGAA
GGTCCGTTCC GTCTGCTCGG CACCATTCTC GAAGCCAACC CCTATCTCGG CCGCATCATC
ACCGGCCGCA TCGCGTCCGG TTCGGTGAAG CCGAACCAGG CCGTGAAGGT GCTGTCGCGC
GACGGCAAGA CGGTTGAATC CGGACGCATC ACCAAGATCC TCGCCTTCCG CGGCCTTGAG
CGCCAGCCGG TCGACCTCGC CGAAGCCGGC GATATCGTCG CCATCGCCGG CCTCACCAAG
GGCACTGTCG CCGACACGTT CTGCGATCCC GCCGTCGAGA ACCCGATCCA GGCCCAGCCG
ATCGATCCGC CGACCGTGTC GATGTCGTTC ATCGTCAACA ACTCGCCGCT CGCCGGCACC
GAAGGCGACA AGGTCACCAG CCGCCTGATC CGGGACCGGC TGCTGCGCGA AGCCGAAGGC
AACGTCGCGC TGCGCGTGGC GGAAGCCACG GACAAGGATT CGATGGAAGT GTCGGGCCGC
GGCGAATTGC AACTCGCTAT CCTGATCGAG AACATGCGCC GCGAAGGCTT CGAGCTGTCG
GTGTCGCGTC CCCGCGTCGT TCTGACCAAG GACGACAACG GTCAGTTGCT TGAGCCGATC
GAGGAAGTCG TGATCGACGT CGACGAGGAG CATTCGGGCG TCGTCGTGCA GAAGATGAGC
GAGCGCAAGG CCGAGATGAT GGAGATGAGG CCGTCCGGCG GCAACCGGCT GCGGCTGGTG
TTCCATGCGC CCACCCGCGG CCTGATCGGC TATCAGGGCG AACTGCTCAC CGACACCCGC
GGAACCGCCA TCATGAACCG GCTGTTCCAC GGCTATTATC CGTACAAGGG CGATATCCAG
GGACGCCGCA ACGGCGTGCT GATTTCCAAC GACCAGGGCG AGGCGGTGGC TTACGCGATG
TTCAAGCTGG AAGATCGCGG CCCGATGATG ATCGAGCCGG GCTGGAAGGT CTATCGCGGC
ATGATCGTCG GCGAACACAC CCGCGACAAC GACCTCGAGA TCAACGTGCT CAAGGGCAAG
CAACTCACCA ATATCCGCAC CACGTCGAAG GACGAGGCGG TGCGGCTGAC GCCGCCGATC
AGGATGACGT TGGAAAAAGC GCTGGCCTAT ATCGAGGGCG ACGAGCTGGT CGAGGTGACG
CCGAAGTCGA TCCGCCTGCG CAAGAAGCAC CTCGATCCCA ACGAGCGCAA GCGCGCCGAG
AAGACCAAGG AGATGGTGGC GTAG
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| Protein sequence | MRPPPKARAT RGFPDEEETS PMNLRNIAII AHVDHGKTTL VDRLLQQSGT YRDNQRVVER
AMDSNDIERE RGITILAKCT SVEWADTRIN IVDTPGHADF GGEVERILSM VDGVIVLVDA
AEGPMPQTKF VVGKALKLGL KPIVAINKVD RPDARVIEVV NEVFDLFAAL DATDDQLDFP
ILYGSGKNGW MGATVEDNDK GMRPLFDLVI KHVAPPVVEE GPFRLLGTIL EANPYLGRII
TGRIASGSVK PNQAVKVLSR DGKTVESGRI TKILAFRGLE RQPVDLAEAG DIVAIAGLTK
GTVADTFCDP AVENPIQAQP IDPPTVSMSF IVNNSPLAGT EGDKVTSRLI RDRLLREAEG
NVALRVAEAT DKDSMEVSGR GELQLAILIE NMRREGFELS VSRPRVVLTK DDNGQLLEPI
EEVVIDVDEE HSGVVVQKMS ERKAEMMEMR PSGGNRLRLV FHAPTRGLIG YQGELLTDTR
GTAIMNRLFH GYYPYKGDIQ GRRNGVLISN DQGEAVAYAM FKLEDRGPMM IEPGWKVYRG
MIVGEHTRDN DLEINVLKGK QLTNIRTTSK DEAVRLTPPI RMTLEKALAY IEGDELVEVT
PKSIRLRKKH LDPNERKRAE KTKEMVA
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