| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0620 |
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| Symbol | ispG |
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| ID | 4030994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 681426 |
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| End bp | 682721 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637969151 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_575968 |
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| Protein GI | 92116239 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGC TCGAAAATCC GTCGCAACGC GACGTGGCAG GCCCAAGCCC GCGGCATAAA
ACCACGCAAG TGATGGTCGG CAGCATCGCT GTCGGCGGCG GCGCGCCGAT CGTGGTGCAA
TCGATGACCA ACACCGACAC CGCCGATGTC GAGGGCACGA TCGCCCAGGT CGCCGCATTG
TCGCGTGCCG GTTCGGAAAT GGTCCGCATT ACCGTGGATC GCGACGAGGC CGCCGCCGCC
GTGCCGCATA TCCGCGACGG CTTGCGCAAG CGCGGCATCG CCACGCCGCT GATCGGCGAT
TTCCACTACA TCGGCCACAA GCTGCTGGCC GATCATCCGG CCTGCGCCGA GGCGCTCGAC
AAGTATCGCA TCAATCCGGG CAACGTCGGT TTCAAGGACA AGCGCGACAA GCAGTTCACC
GACATCGTCG AGATGGCGAT CAAGTACGGC AAGGCGGTGC GGATCGGCGC CAACTGGGGC
TCGCTCGATC AGGAACTGCT GACGCATCTG ATGGAAGAGA ACGCCAATTC GGCGGCGCCG
CTCGAAGCGC GCGCGGTGAC TCGCGAGGCG ATGGTGCAGT CGGCGCTGTT GTCGGCGAAG
CGCGCCGAGG AGATCGGCCT GCCCAAGAAC AGGATGATCC TGTCGGCCAA GGTTTCGGCG
GTGCAGGATC TGATCGCGGT CTACCAGACG CTGGCGTCGC GCTCGGATTA CGCGATCCAC
CTCGGGCTCA CCGAGGCCGG CATGGGCTCG AAGGGCATCG TCGCCTCATC CGCCGCGCTC
GGCATCCTGC TGCAGCAGGG CATCGGCGAC ACCATTCGCA TCTCGCTGAC GCCCGAGCCC
GGCGGCGACC GCACGCGGGA AGTTCAGGTC GCGCAGGAAC TGCTGCAGAC CATGGGCTTT
CGCACCTTCG TGCCGCTGGT CGCGGCCTGC CCCGGCTGCG GGCGCACCAC CTCGACCACG
TTCCAGGAAC TGGCGCGATC GATTCAGGAC TTCATCCGCG ACGAGATGCC GGGCTGGAAG
ACGCAGTATC CCGGCGTCGA GCAGCTCAAC GTCGCGGTGA TGGGTTGCAT CGTCAACGGC
CCCGGCGAAT CCAAGCACGC CGATATCGGC ATCTCGCTGC CGGGCACCGG CGAGGCGCCG
GCGGCGCCCG TCTTCGTCGA CGGCAAGAAA TTCCGCACCT TGCGCGGACC GGCAATCGCG
CAGGACTTCA AGGCGCTGGT GATCGACTAT ATCGATCAGC GCTATGGCAG CGGCGGCAAG
ACGCCGACGG ATGCCACGAC AGCCGCGGCG GAATGA
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| Protein sequence | MNKLENPSQR DVAGPSPRHK TTQVMVGSIA VGGGAPIVVQ SMTNTDTADV EGTIAQVAAL
SRAGSEMVRI TVDRDEAAAA VPHIRDGLRK RGIATPLIGD FHYIGHKLLA DHPACAEALD
KYRINPGNVG FKDKRDKQFT DIVEMAIKYG KAVRIGANWG SLDQELLTHL MEENANSAAP
LEARAVTREA MVQSALLSAK RAEEIGLPKN RMILSAKVSA VQDLIAVYQT LASRSDYAIH
LGLTEAGMGS KGIVASSAAL GILLQQGIGD TIRISLTPEP GGDRTREVQV AQELLQTMGF
RTFVPLVAAC PGCGRTTSTT FQELARSIQD FIRDEMPGWK TQYPGVEQLN VAVMGCIVNG
PGESKHADIG ISLPGTGEAP AAPVFVDGKK FRTLRGPAIA QDFKALVIDY IDQRYGSGGK
TPTDATTAAA E
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