Gene Nham_0558 details

Gene Information

• Locus tag: Nham_0558
• ID: 4031306
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: -
• Start bp: 617458
• End bp: 619416
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637969088
• Product: acetyl-CoA synthetase
• Protein accession: YP_575908
• Protein GI: 92116179
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02188] acetate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGACA AGATTTATGA CGTAAGCGCG GATTGGGCCA AGCGGGCCTG GGTCGACGAC 
GCCAAATATC ACGAGATGTA CGCGCGCTCG ATCAAGGACC CGAACGGGTT CTGGTCCGAG 
GCCGCCAAGC GGGTCGACTG GATCACGCCC TTCACCAAGG TCGAGAACAC CTCGTTCGAA 
CTCGGCAAGG TGTCGATCAA ATGGTTCGAG GATGGCGTGC TCAACGCCGC CTACAACTGC 
ATCGACCGGC ATCTGGAAGA GCGCGGCGAC CAGACCGCGA TCATCTGGGA AGGCGACGAT 
CCCTCGCAGT CGAGGCACAT CAGCTATCGC GAACTGCACG ACGAAGTCTG CAAGATGGCC 
AACATCCTGC GGCTGCGCAA CGTCAAGAAG GGCGATCGCG TCACCATCTA CCTGCCGATG 
ATTCCGGAAG CCGCCTACGC CATTCTCGCC TGCGCGCGGA TCGGCGCGAT CCACTCGGTG 
GTGTTCGGCG GCTTCTCGCC CGATTCCATC GCCGGACGTC TGCGCGATTG CAAATCCCGC 
GTCGTCATCA CCTCCGACGA GGGCCTGCGC GGCGGCCGCA CCATCGCCAT GAAGGCCAAC 
GTCGATACCG CGATCGAAAA GGTCAACGGC GAGGTCGACT GGGTGATCGT CGTCAAGCGC 
ACCGGCGGCA AGGTCAACAT GAACCCGACG CGCGACGTCT GGTATCACGA GGCCGCGGCC 
GTGGTCGAAA GCGAATGTCC GTGCGAGCCG ATGCACGCGG AAGACCCGCT GTTCATCCTC 
TACACCTCGG GCTCGACCGG ACAGCCCAAG GGCGTGCTGC ACACCACCGC CGGCTACCTG 
ATCTTCGTGG CGATGACGCA CCAGTACGTG TTCGACTATC ACGACGGCGA CATCTACTGG 
TGCACCGCCG ACGTCGGCTG GGTCACCGGC CACAGCTACA TTCTCTACGG GCCGCTGTGC 
AACGGCGCGA CCACGATGAT GTTCGAGGGC GTGCCGAACT ATCCGGACAA TTCGCGGTTC 
TGGAATGTGA TCGACAAGCA CAAGGTCAAC ATCTTCTACA CCGCGCCGAC CGCGATCCGG 
GCCTTGATGC AGGGGGGCGA CGATCCGGTG AAGAAAACCT CGCGCGCAAG CCTGCGCCTG 
CTCGGCTCGG TCGGCGAGCC GATCAATCCG GAAGCCTGGG AATGGTACCA CCGCGTGGTC 
GGCGACGGCC GCTGCCCGGT GGTCGATACC TGGTGGCAGA CCGAGACCGG CGGCATCATG 
ATCTCGCCGC TGCCGGGTGC GATCGCGCAG AAGCCCGGCT CGGCGACCAG GCCGTTCTTC 
GGAATCGTGC CCGAGATCGT CGATGCCGAC GGCAAGGTGC TGGAAGGCGA ATGCAGCGGC 
AATCTGTGCA TCGCGCGGTC GTGGCCGGCC CAGGTGCGCA CGGTCTATGG CGATCACGCC 
CGCTTCGAGC AGACTTACTT CTCCTCCTAC AAGGGCAAGT ACTTCTCCGG TGACGGCTGC 
CGCCGCGACG CCGACGGCTA CTACTGGATC ACCGGCCGCG TCGATGACGT CATCAACGTC 
TCCGGCCACC GCATGGGCAC GGCGGAAGTC GAAAGCTCGC TGGTGGCGCA CGAGAGCGTG 
TCGGAGGCTG CCGTGGTCGG CTATCCCCAT AACATCAAGG GCCAGGGCAT CTACGCCTAC 
GTGACCCTGA TGCAGGGCGT GGAGCCGAGC GAGACGCTGC GCAAGGAATT GGTCGCCTGG 
GTGCGCAAGG ACATCGGCCC GATCGCGTCG CCCGACCTGA TCCAGTTCGC GCCGGGCCTG 
CCGAAAACCC GTTCCGGCAA GATCATGCGC CGCATCCTGC GCAAGATTGC CGAGGACGAG 
CCGTCCAGCC TTGGCGACAC CACGACGCTG GCCGATCCCG GCGTCGTCAC CGACCTCGTC 
AAGAATCGTC AGAACAAGAA GGACGGCGCC GTGGCGTAG 

 

Protein sequence

MSDKIYDVSA DWAKRAWVDD AKYHEMYARS IKDPNGFWSE AAKRVDWITP FTKVENTSFE 
LGKVSIKWFE DGVLNAAYNC IDRHLEERGD QTAIIWEGDD PSQSRHISYR ELHDEVCKMA 
NILRLRNVKK GDRVTIYLPM IPEAAYAILA CARIGAIHSV VFGGFSPDSI AGRLRDCKSR 
VVITSDEGLR GGRTIAMKAN VDTAIEKVNG EVDWVIVVKR TGGKVNMNPT RDVWYHEAAA 
VVESECPCEP MHAEDPLFIL YTSGSTGQPK GVLHTTAGYL IFVAMTHQYV FDYHDGDIYW 
CTADVGWVTG HSYILYGPLC NGATTMMFEG VPNYPDNSRF WNVIDKHKVN IFYTAPTAIR 
ALMQGGDDPV KKTSRASLRL LGSVGEPINP EAWEWYHRVV GDGRCPVVDT WWQTETGGIM 
ISPLPGAIAQ KPGSATRPFF GIVPEIVDAD GKVLEGECSG NLCIARSWPA QVRTVYGDHA 
RFEQTYFSSY KGKYFSGDGC RRDADGYYWI TGRVDDVINV SGHRMGTAEV ESSLVAHESV 
SEAAVVGYPH NIKGQGIYAY VTLMQGVEPS ETLRKELVAW VRKDIGPIAS PDLIQFAPGL 
PKTRSGKIMR RILRKIAEDE PSSLGDTTTL ADPGVVTDLV KNRQNKKDGA VA