| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0542 |
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| Symbol | sucA |
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| ID | 4030834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 597850 |
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| End bp | 600819 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637969072 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_575892 |
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| Protein GI | 92116163 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGCC AGAACGCGAA TGCAGCATTT GCCCTTTCCT CGTTCTTGCA GGGCGCGAAC
GCCACTTATA TCGACGGTCT CTACGCCCGC TACGAGAAAG ACCCCGGCTC GGTCGATGCC
GAATGGCAGG AGTTCTTCAA AAGCCTGAAG GACGCTCCCG ACGACGTCCG GAAGAACGCA
AAAGGCCCGT CCTGGGAGAA GGCGAATTGG CCGCTGGCGC CGCAGGACGA CCTTATCTCC
GCGCTCGACG GCAACTGGAC GCAGATCGAG AAGGCCGTCG GCGCCAAGCT GCAGGCTAAG
GCGCAGGGGG AGGCGCAAGC GAGGGATTCG GCGCTGGCCG GCGTCGATGT CAACCAGGCC
ACTCGCGATT CGGTTCGCGC GCTGATGCTG ATCCGCGCCT ATCGCATGCG CGGGCATTTC
CATGCCAGGC TCGACCCGCT CGGTCTCGAA CCTGCGCGCG ATCATGAAGA ACTCGACCCG
CGCGCCTACG GCTTCACCGA TGCCGACATG GATCGCAAGA TCTTTCTCGA CCACGTCCTC
GGCCTCGAAT ACGGCACGCT GCGCGAGATC GTTGCGATCT GCGAGCGGAC CTACTGCCAG
ACGCTCGGCG TCGAGTTCAT GCACATTTCG AACGGCGCGC AGAAAGGCTG GATACAGGAG
CGCATCGAGG GGCCGGACAA GGAGATCAGC TTCACGCCGG AGGGCCGTCG CGCCATCCTG
AAGAAGCTCG TCGAGGCGGA AGGCTTCGAG AAGTTCTGCG ACGTCAAGTT CACCGGCACC
AAGCGCTTCG GTCTCGACGG CGGCGAATCG CTGATTCCGG CGCTGGAGCA GATCATCAAG
CGGGGCGGCA ACCTCGGCGT CAAGGAAATC GTGATCGGCA TGCCGCACCG CGGGCGGCTG
AACGTGCTGA CGCAGGTGAT GGGCAAGCCG CATCGCGCGC TGTTCCACGA ATTCAAGGGC
GGCTCGGCCA ATCCCGACGT GGTCGAGGGC TCGGGCGACG TCAAGTATCA TCTTGGCGCG
TCGTCGGACC GCGAGTTCGA CAACAACCGG ATCCACCTGT CGCTGACCGC CAACCCCTCG
CACCTCGAAA TCGTCGATCC GGTGGTGCTC GGCAAGGTGC GCGCCAAGCA GGACCAGCAC
GGCGATCCGC CCGACCAGCG CGACTCGGTG CTGCCGTTGC TGATGCACGG CGACGCCGCC
TTCGCGGGGC AAGGCGTGGT GGCGGAATGC TTCGCGCTGT CGGACCTCAA GGGTTACCGC
ACCGGCGGCT CGATCCACTT CATCGTCAAC AACCAGATCG GCTTCACCAC CTATCCGCGC
TACTCGCGCT CGTCGCCCTA TCCGTCCGAC CTTGCGAAGA TGATCGATGC GCCGATCTTC
CACGTCAACG GCGACGACCC GGAAGCCGTG GTATTCGCTG CCAAGGTGGC GATCGAATTC
CGGCAGAAGT TCCACAAGCC GGTCGTGATC GACATGTTCT GCTATCGCCG TCACGGTCAC
AACGAAGGCG ACGAGCCGTC GTTCACCAAC CCGATGATGT ACAAGAAGAT CGCGGCGCAC
CCCTCGACGC TCGAACTGTA CGCGAAGCGG CTGTCCACCG AAGGTGTCAT AACCGATGGC
GAGATCGAAA AACTGAAAGC CGACTGGCGC GCACGGCTCG ACGCCGAATT CGAGGCCGGC
GCCGGCTACA AGCCGAACAA GGCCGACTGG CTCGACGGCA AGTGGGCGGG CTTCAAGCTC
GCCGATCAGG ACGAGGAGCC GCGCCGTGGC GTCACCGGCG TGGACATCGC GACGCTAAAG
CAGATCGGCC GCAGCATAAC CCGGGTGCCG GACGGTTTCC GCGTGCATCG CACGGTGCAG
CGCTTTCTCG ATAACCGCGC CAAGGCGATC GATCGCGGCG TCGGCATCGA CTGGGCAACG
GCCGAGGCGC TGGCGTTCTG CACCCTGGTG CTGGAGGGCC ACAACGTCCG GCTGTCCGGC
CAGGACAGCG AGCGCGGCAC CTTCTCGCAG CGGCATTCGG TGCTGTTCGA CCAGGAAGAC
GAGAGCCGCT ACACGCCATT CAACCACCTC GGCAAGGATC AGGGCCGCTA CGAGGTCATC
AACTCGCTGC TGTCGGAAGA AGCGGTGCTC GGCTTCGAAT ACGGCTATTC GCTCGCGGAG
CCCAACACGC TCACGCTGTG GGAGGCGCAG TTCGGCGACT TCGCCAACGG CGCGCAGGTG
TTGTTCGACC AGTTCATCTC CTCCGGCGAG CGCAAGTGGC TGCGCATGTC GGGCCTCGTC
TGCATGCTGC CCCACGGCTA TGAGGGCCAG GGGCCGGAGC ATTCCTCGGC GCGGCTGGAG
CGCTTCCTGC AGATGTGCGC GGAAGACAAC ATGCAGGTGG TCAACATCTC CACGCCGGCC
AACCATTTCC ATGCGCTGCG CCGGCAGTTG AAGCGCCAGA TCCGCAAGCC CCTGATCATG
ATGACGCCGA AGTCGCTGCT ACGTCACAAG CGGGCGGTAT CGCGTCTCGA CGAACTCGGC
GCCGACACCG CGTTCCACCG TATCCTTTAC GACGACGCGA CAATACTGCC GGACCAGAAG
ATCAGGCTGG TGGAGGACGA GAAGATCCGC CGCGTGGTGC TGTGCTCCGG CAAGGTCTAC
TACGACCTCT ACGAGGAGCG CGCGAAGCGC GACATCGCCG ATGTCTACCT GTTGCGGATC
GAGCAGTTGT ATCCGGTGCC GCTGAAGGCG CTGGTGCAGG TCCTCGGCCG CTTCAACAAG
GCCGAGATCG TCTGGTGCCA GGAAGAACCA CGCAACATGG GCGCGTGGCA CTTCATCGAG
CCCTATCTCG AATGGGTTCT CAACCAGATC GACGCACCCA ACAAGCGCCC GCGTTATGCC
GGCCGCGCCG CCGCCGCGGC CACCGCGACC GGGTTGATGT CGAAGCATCT TGCGCAACTC
AAGGCGTTGC TTGACGAAGC GTTGGACTGA
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| Protein sequence | MSRQNANAAF ALSSFLQGAN ATYIDGLYAR YEKDPGSVDA EWQEFFKSLK DAPDDVRKNA
KGPSWEKANW PLAPQDDLIS ALDGNWTQIE KAVGAKLQAK AQGEAQARDS ALAGVDVNQA
TRDSVRALML IRAYRMRGHF HARLDPLGLE PARDHEELDP RAYGFTDADM DRKIFLDHVL
GLEYGTLREI VAICERTYCQ TLGVEFMHIS NGAQKGWIQE RIEGPDKEIS FTPEGRRAIL
KKLVEAEGFE KFCDVKFTGT KRFGLDGGES LIPALEQIIK RGGNLGVKEI VIGMPHRGRL
NVLTQVMGKP HRALFHEFKG GSANPDVVEG SGDVKYHLGA SSDREFDNNR IHLSLTANPS
HLEIVDPVVL GKVRAKQDQH GDPPDQRDSV LPLLMHGDAA FAGQGVVAEC FALSDLKGYR
TGGSIHFIVN NQIGFTTYPR YSRSSPYPSD LAKMIDAPIF HVNGDDPEAV VFAAKVAIEF
RQKFHKPVVI DMFCYRRHGH NEGDEPSFTN PMMYKKIAAH PSTLELYAKR LSTEGVITDG
EIEKLKADWR ARLDAEFEAG AGYKPNKADW LDGKWAGFKL ADQDEEPRRG VTGVDIATLK
QIGRSITRVP DGFRVHRTVQ RFLDNRAKAI DRGVGIDWAT AEALAFCTLV LEGHNVRLSG
QDSERGTFSQ RHSVLFDQED ESRYTPFNHL GKDQGRYEVI NSLLSEEAVL GFEYGYSLAE
PNTLTLWEAQ FGDFANGAQV LFDQFISSGE RKWLRMSGLV CMLPHGYEGQ GPEHSSARLE
RFLQMCAEDN MQVVNISTPA NHFHALRRQL KRQIRKPLIM MTPKSLLRHK RAVSRLDELG
ADTAFHRILY DDATILPDQK IRLVEDEKIR RVVLCSGKVY YDLYEERAKR DIADVYLLRI
EQLYPVPLKA LVQVLGRFNK AEIVWCQEEP RNMGAWHFIE PYLEWVLNQI DAPNKRPRYA
GRAAAAATAT GLMSKHLAQL KALLDEALD
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