| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0504 |
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| Symbol | |
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| ID | 4029932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 556605 |
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| End bp | 560027 |
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| Gene Length | 3423 bp |
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| Protein Length | 1140 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637969032 |
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| Product | helicase-like |
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| Protein accession | YP_575854 |
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| Protein GI | 92116125 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.68867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTTTT CGTCTTCGAT ATCCCCGCCC GGCAACGGTC GCGCGCCCGG TACGGGCGTG
ACGGCGGTGC TCGGTCCGAC CAACACCGGC AAGACCCATC TCGCGATCGA GCGGATGCTG
GCGCATTCCT CCGGCATCAT CGGCCTGCCG CTGCGGCTGC TTGCCCGCGA GGTCTACAAC
AAGATTGCCG ACCGCGCCGG CCCGGACTCC GTCGCGCTGA TCACCGGCGA GGAGAAGATC
AAGCCGGCGC GGCCGCGCTT CTGGGTTTCG ACTGTGGAAG CGATGCCGCG CGACCTCGAC
GTCTCGTTCC TCGCCGTCGA CGAAATCCAG ATCAGTGCCG ATCTCGAGCG CGGCCACGTT
TTCACCGATC GCATTCTGCA CCGGCGCGGC CGCGACGAGA CGCTGCTGCT CGGCGCCGCG
ACCATGCGTC CGATCATCGA GCGGCTGCTG CCGGGCGCGA GCATCGTCAC CCGCCCCCGG
CTGTCGCAGC TTGAGTTCGC CGGCGACCGC AAGATCACCC GACAGCCGCG CCGCACCGCG
ATCGTCGCGT TTTCGGCGGA CGAAGTCTAC GCCATCGCCG AACTGATCCG CCGCCAGCAC
GGCGGCGCGG CGGTGGTGCT GGGATCGCTG TCGCCGCGCA CCCGCAACGC GCAGGTCGCG
ATGTTCCAGT CCGGCGACGT CGATTATCTC GTCGCCACCG ACGCGGTCGG CATGGGCCTT
AATCTCGACG TCGATCACGT CGCCTTCGCC TCCGACCGCA AATACGACGG CTACCAGTTT
CGCAGGCTGA CGCCGGCGGA GTTCGCGCAA GTTGCCGGCC GCGCCGGCCG CGCCACCCGC
AACGGCACCT TCGGCACCAC CGGGCGCTGC GCGCCGTTCG AGCCCGAACT CGTGAATGCG
CTGCAGAACC ACACGTTTGA GGCCGTCAAG ACGCTGCAGT GGCGCAACTC CGATCTCGAT
TTCTCCTCGC TCGGCGCGCT GCAGGTGTCG CTGGCGCTGA CACCCCCGCA CGAGGCGCTG
ACCCGCGCGC CGATCGCCGA GGACCTGCGC GTGCTCGATC ACGCCGCGCG CGATGTCGAC
GTGCGCGCCA TGGCGCATGG CGCGGCGGCG GTGGAGCGGT TATGGGATGC CTGCCAGATT
CCGGACTATC GCAAGATCGC GCCGGCCGCC CACGCCGAAC TGGTCACGAC ACTGTTCGGT
TTCCTGATGC GGAAGGGCCG GGTTCCTGAC GACTGGTTCG CGGCCCAGAT AGCCCAGGCC
GACCGCATCG ACGGCGGTAT CGACACCCTG TCGGGGCGGA TTGCGCAAAT TCGGACCTGG
ACCTTTGTTG CCAATCGCCC CGACTGGCTG GCCGATCCCG AGCACTGGCA GGGAATTTCG
CGCCAAGTCG AAAATAAATT GTCAGATGCG CTGCACCAAA GGCTCACGGA GCGTTTCGTT
GACCGTCGGA CCAGTGTATT GATGCGCCGC CTGCGGGAAA ACACGATGTT GGATACGGAA
ATTGGCAAGA CCGGCGAAGT GATCGTAGAG GGCCATGTGA TCGGCCGTCT CGACGGATTT
ACTTTCGCGC CGGATGCGGC AGAGGCCGGC TCGGAGGCCA AGGCCTTGCA GGCGGTCGCG
CAAAAGGCGC TGGCCGGCGA AATCGAGGCG CGCGCCGAAA AACTGTCCGG CGCACCGGAC
GATCAGTTCG TGCTGACCTC GGACGGCACC ATTCGCTGGA CCGGTGATGC CGTGGCGCGA
CTGGCCGCCG CGGACGACGT GCTGCATCCG CGGCTGCGGA TCATTTCCGA TGAACGGCTG
ACCGGTGCAC CGCGCGATGC GGTACAGGCG CGGCTCGATC TGTGGCTGAA GACCCATATC
GAAAAGCTGC TCGGGCCGCT GTTCGAGTTG TCCAAGGCGG AGGATGTGAC CGGCATCGCG
CGCGGCATTG CATTCCAGTT GATCGAGGCG CTCGGCGTGC TGGAGCGCTC GAGGATCGCC
GCCGAAATGA AAGATCTCGA TCAGCCGTCG CGCGCCAGCT TGCGCAAGTA CGGCGTGCGC
TTCGGTGCCT ACCACATCTA CTTCCCGGCG CTTCTGAAAC CGGCGGCGCG GTCGCTGGCC
TCGCTGTTGT GGGCACAGAA GCAGGACAAC TGCGATCTGT CGGCGTTGTC GAGCGCGCAG
CATCTGGCAG GCAGCGGCCG CACCTCATTC CCGGCCGACA AGCTGCTCGA TCGCGACGCC
TATCGTACCC TCGGCTATCG GCAATGCGGC GAGCGGGCCG TCCGCGTCGA CATCCTCGAA
AGGCTGGCCG ATCTGATCCG TCCGGCGCTT GCTTGGCGGG AAGGGGCGCC CGGCGAAAAA
CCGGCCGGCG CATTCGATGG CCGCGGGTTC GTCGTGACCC AGGCCATGAC ATCGCTCGCA
GGCACCGCCG GCGAGGATTT TGCCTCCATC CTGCGCGCGC TCGGCTACCG CATGGAGCAG
TGCCTGCCCC CGCCCGTTAC AGAGACCGGT CCTGCGCCGG ATGCCGCCGC GGAAACGGTT
TCCGCCGAAG CGCCGGAGAG CACGCCGCCG GGATCGGCCG CGCCGGACGC CATGCCCGAG
GGGCAGGAAC CTGCGCCGGA TAGCGCGGTT GCGCCCGATG CTGGATCGGC TGAACCGGCG
TCTGCCGCGG ATGCGGGTTC ATCGGACGAT ACCGCCACGG CTACCGAAGT CTTGGCGACC
GAAGCCTTGG CTGAGGTGGT CGAGGAAACG TCGCCGTCGG CGGTGTCACC GCCCGACATC
GCAGACTCGG CGGCTTCCGA CGATGCCGTC GAAACCGCAC CCGCCGATGC CACGCCGGAT
CAGTCCGTGC CGGCCGATGC CGAGGGTGTG GCATCCGCCG AGATTGCCGC AGCGGATGCC
TCGTCGGCTC ATGCTACGGA CGCAGCGCCC GCAACCGTCG AGGTTTGGCG GCCGGGCGGC
CGGCCCGCCG ATCGGCGTCC GCGCCACGAC CGCAGCCGTC ATCGCCGGCA ACAGCCTCGG
CAGGATGGTG CGCAACCGGC GGTCGCGGAC GGCGAAGCGG GCGAGGGGGC GCAGAAGCGC
GAGCGACATG GGCGGGGGCG GCGCGAGCGT CAAAAGGAGG CTCGTCGGCC CTCCACTGGT
GTGGCCGCCG AAGGCGCGTC CGCCGGGAGC GAGAGCGCGC CCGGCCGTGA GCTGCGCGAG
GGCAAGGGGC GTCCGCAGCG CGATCCCTTC CAGGGCAAAG GCAAAAACAG GGACAGGGAT
CAGGACAAGG GCCGGTTCCA GGGCTCACGC AAGGGCGGCC GCGAGGGACG TCCGGACGCC
GGACCGTCGC ACCGCCCCTA CGCCAGCAGC GCGCCGCGTG AGCGCGAGCG TCCGATGGAC
CCGAATTCGC CGTTTGCGAA ACTGGCCGCG CTCAGGGAGC AGCTTGCTGG CCGCAAGGAC
TGA
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| Protein sequence | MAFSSSISPP GNGRAPGTGV TAVLGPTNTG KTHLAIERML AHSSGIIGLP LRLLAREVYN
KIADRAGPDS VALITGEEKI KPARPRFWVS TVEAMPRDLD VSFLAVDEIQ ISADLERGHV
FTDRILHRRG RDETLLLGAA TMRPIIERLL PGASIVTRPR LSQLEFAGDR KITRQPRRTA
IVAFSADEVY AIAELIRRQH GGAAVVLGSL SPRTRNAQVA MFQSGDVDYL VATDAVGMGL
NLDVDHVAFA SDRKYDGYQF RRLTPAEFAQ VAGRAGRATR NGTFGTTGRC APFEPELVNA
LQNHTFEAVK TLQWRNSDLD FSSLGALQVS LALTPPHEAL TRAPIAEDLR VLDHAARDVD
VRAMAHGAAA VERLWDACQI PDYRKIAPAA HAELVTTLFG FLMRKGRVPD DWFAAQIAQA
DRIDGGIDTL SGRIAQIRTW TFVANRPDWL ADPEHWQGIS RQVENKLSDA LHQRLTERFV
DRRTSVLMRR LRENTMLDTE IGKTGEVIVE GHVIGRLDGF TFAPDAAEAG SEAKALQAVA
QKALAGEIEA RAEKLSGAPD DQFVLTSDGT IRWTGDAVAR LAAADDVLHP RLRIISDERL
TGAPRDAVQA RLDLWLKTHI EKLLGPLFEL SKAEDVTGIA RGIAFQLIEA LGVLERSRIA
AEMKDLDQPS RASLRKYGVR FGAYHIYFPA LLKPAARSLA SLLWAQKQDN CDLSALSSAQ
HLAGSGRTSF PADKLLDRDA YRTLGYRQCG ERAVRVDILE RLADLIRPAL AWREGAPGEK
PAGAFDGRGF VVTQAMTSLA GTAGEDFASI LRALGYRMEQ CLPPPVTETG PAPDAAAETV
SAEAPESTPP GSAAPDAMPE GQEPAPDSAV APDAGSAEPA SAADAGSSDD TATATEVLAT
EALAEVVEET SPSAVSPPDI ADSAASDDAV ETAPADATPD QSVPADAEGV ASAEIAAADA
SSAHATDAAP ATVEVWRPGG RPADRRPRHD RSRHRRQQPR QDGAQPAVAD GEAGEGAQKR
ERHGRGRRER QKEARRPSTG VAAEGASAGS ESAPGRELRE GKGRPQRDPF QGKGKNRDRD
QDKGRFQGSR KGGREGRPDA GPSHRPYASS APRERERPMD PNSPFAKLAA LREQLAGRKD
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