| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0453 |
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| Symbol | |
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| ID | 4030088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 499092 |
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| End bp | 502136 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637968981 |
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| Product | DNA polymerase I |
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| Protein accession | YP_575803 |
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| Protein GI | 92116074 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAGA AGCCCACCCC TGCCACCAAG CCCGTACCCA CTCCCGCCGC CGCGGAAGCT
GTGACCGTGA AGTCCGCGGC CGCGACCAAG TCAGACATGC AGGGCAAGCA CGTCTTTCTG
GTCGACGGCT CCTCCTACAT CTTCCGCGCC TATCACGCGC TGCCGCCGCT GAACCGCAAA
TCCGACGGCT TGCAGGTCAA CGCGGTGCTC GGCTTCTGCA ACATGCTGTG GAAGCTGTTG
CGCGACATGC CGAAGGACGA CAAGCCGACC CACCTTGCGA TCATCTTCGA CAAGTCCGAG
GTGACGTTCC GCAACAAGCT CTATCCCGCC TACAAGGCGC ATCGGCCGCC CGCGCCCGAC
GACCTGATCC CGCAATTCGC GCTGATTCGC GAGGCCGTGA AGGCGTTCGA TCTGCCCTGC
ATCGAGCAGG GCGGGTTCGA GGCCGACGAC CTGATCGCGA CCTATGTGCG GCAGGCGTGC
GAACGCGGCG CAACCGCGAC CATCGTCTCC TCGGATAAGG ATCTGATGCA GCTCGTCACC
GATTGCGTCA CCATGTTCGA CACCATGAAG GACCGCCGCC TCGGCATCGC CGAGGTGATC
GAGAAATTCG GCGTACCGCC GGAAAAAGTC GTCGAGGTGC AGGCACTGGC CGGCGACAGC
GTCGACAACG TGCCGGGCGT GCCGGGCATC GGCGTCAAGA CCGCGGCGCA GCTCATCACC
GAATACGGCG ACCTCGAAAC GCTGCTGGCG CAGGCCTCCG AGATCAAGCA GCCGAAGCGA
CGCGAGGCGC TGATCGAAAA CGCCGAGAAG GCGCGCATTT CGCGGCAACT GGTGCTGCTC
GACGACCACG TCGCGCTCGA CGTGCCGCTG GACGACCTCG CCGTGCAGGA GCCCGATGCA
CGCAAGCTGA TCGCTTTCTT GAAGGCGATG GAATTCACCA CGCTGACCAA GCGCGTCGCC
GACTATTCCG AGGTCAACGC GGCCGAGATC GAGCCAGACA GGAAAAACGC CAGCGGCGCG
TCTTCCACAG CAGCCAAGGC ATCCGCAGAG GCCGTCACCA GCGACTTGTT CGGCAGCGAC
GGTGTCGCGA AGGCGACATC GGCCGGCAGG ACAAGGGCGA CGAGCGACAC GGCGATCAAG
ACGCCGCAGG CCCTCGCCGC GGCGCGCCTC GAAGCGGTTC GAAAACTGCC GGTCGATCGC
ACACAATACG AAACCATCCG CACGCTCGAC CGGCTGCAGC ACTGGATCGC CCGCATCGCG
AACCATGGCA GTTTCGTCGT CGAAGCGCTG GCGCCGACAA TAGACCCTAT GCAGGCCGAA
TTGTCCGGCA TCGCGCTGGC GCTCGCGCCG AACGCGGCGT GCTACGTCCC GCTCAACCAC
AAGCAGGCCG GCGACAGCGC CGGTCTGTTC GCCGCCGGCC TTGCGCCCGA TCAGATCGCG
ATCCGTGACG CGCTCGACCT GCTAAAGCCG CTCCTCGAAT CCGGCGGCCA CCTGAAGGTC
GGCTTCAACG TCAAGTTCAC CGCCGTGCTG CTCGCGCAAC ACGGCATCGT CATGCAGAAC
AACGACGACG TCGAGCTGAT TTCCTACGCG CTCGATGCCG GACGCGGCGC CCACGATCTC
GAAGCGCTGG CGCAGCGCTG GCTCGATCAC ACGGCCTTGA ACTATGGCGA ACTGATCGGC
AGCGGCAGGA ACAAGCTTGC CTTCGATCAG GTGACGATCG ATCGCGCCAC GACTTACGCG
GCGGAGTACG CCGCCCTGAC CTTGCGGCTG TGGCAGGTGT TGAAGCCGCG GCTGGTCGCC
GAGCGTATGA ATTCTGTCTA CGAGACGCTG GAACGGCCGA TGATTGCGAC GCTGGCGCGG
ATGGAGCGGC GCGGCATCAC CATCGACCGG CAGGTGCTGT CGCGCCTGTC TGGCGAATTC
GCGCAGACCG CGGCGCGACT GGAAGCCGAA ATCCAGAAGC TTGCCGGCGA GCCGATCAAT
GTCGGCAGCC CGAAGCAGAT CGGCGAGATC ATGTTCGGCA AGATGGGCTT GCCGGGCGGC
AGCAAGACCA AGACCGGCGC ATGGTCCACC TCGGCGCAAA TCCTGGACGA CCTCGCCGAG
CAGGGCCACG ACTTCCCGCG CAAGATTCTC GACTGGCGGC AGGTTTCAAA ACTGAAATCG
ACCTATACCG ACGCGCTGCC GGAATACGTC AATCCGCAGA CCAGCCGCGT GCACACCACC
TATGCGCTCG CCGCCACCAC CACCGGGCGG CTGTCGTCGA ACGAGCCCAA CCTGCAGAAC
ATTCCGGTGC GCAATGAGGA AGGGCGAAAA ATCCGCCGCG CCTTCATCGC CACGCCCGGC
CACAAGCTGG TCTCGGCCGA CTACTCCCAG ATCGAACTGC GGCTGCTCGC CGAGATCGCC
GACATCCCGG TGTTGAAACA AGCGTTCCGC GACGGGCTCG ACATTCACGC CATGACGGCG
TCGGAAATGT TCGGCGTGCC GGTGACGGGC ATGCCGGGCG AAATCCGCCG CCGCGCCAAG
GCCATCAATT TCGGCATCAT CTACGGTATC TCGGCGTTCG GCCTCGCCAA CCAGCTCGGC
ATCCCGCGCG AGGAAGCCGG CACCTACATC AAGAAATATT TCGAGCGCTT TCCCGGCATC
CGCGCCTACA TGGACGCGAC CCGCGACTTC TGCCGCGAGC ACGGTTATGT CGAAACGCTG
TTCGGACGCA AATGTCACTA TCCGGACATC AAGTCGCCGA ACCCGTCGCA CCGCGCCTTT
AACGAGCGCG CCGCGATCAA TGCGCGATTG CAGGGCACCG CCGCCGACAT CATCCGCCGC
GCCATGGTGC GGATGGACGA TGCGCTGGCG GCGAAGAAGC TGTCCGCGCG AATGCTGCTG
CAGGTCCACG ACGAACTGAT TTTTGAAGTG CCAGACGACG AGGTGGCCGC GACACTGCCG
GTCGTCCAGC ATGTGATGCA GGACGCGCCG TTCCCGGCGA TGCTGCTGTC GGTGCCGTTG
CAGGTCGACG CCCGCGCCGC CGACAACTGG GACGAGGCGC ATTAA
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| Protein sequence | MPKKPTPATK PVPTPAAAEA VTVKSAAATK SDMQGKHVFL VDGSSYIFRA YHALPPLNRK
SDGLQVNAVL GFCNMLWKLL RDMPKDDKPT HLAIIFDKSE VTFRNKLYPA YKAHRPPAPD
DLIPQFALIR EAVKAFDLPC IEQGGFEADD LIATYVRQAC ERGATATIVS SDKDLMQLVT
DCVTMFDTMK DRRLGIAEVI EKFGVPPEKV VEVQALAGDS VDNVPGVPGI GVKTAAQLIT
EYGDLETLLA QASEIKQPKR REALIENAEK ARISRQLVLL DDHVALDVPL DDLAVQEPDA
RKLIAFLKAM EFTTLTKRVA DYSEVNAAEI EPDRKNASGA SSTAAKASAE AVTSDLFGSD
GVAKATSAGR TRATSDTAIK TPQALAAARL EAVRKLPVDR TQYETIRTLD RLQHWIARIA
NHGSFVVEAL APTIDPMQAE LSGIALALAP NAACYVPLNH KQAGDSAGLF AAGLAPDQIA
IRDALDLLKP LLESGGHLKV GFNVKFTAVL LAQHGIVMQN NDDVELISYA LDAGRGAHDL
EALAQRWLDH TALNYGELIG SGRNKLAFDQ VTIDRATTYA AEYAALTLRL WQVLKPRLVA
ERMNSVYETL ERPMIATLAR MERRGITIDR QVLSRLSGEF AQTAARLEAE IQKLAGEPIN
VGSPKQIGEI MFGKMGLPGG SKTKTGAWST SAQILDDLAE QGHDFPRKIL DWRQVSKLKS
TYTDALPEYV NPQTSRVHTT YALAATTTGR LSSNEPNLQN IPVRNEEGRK IRRAFIATPG
HKLVSADYSQ IELRLLAEIA DIPVLKQAFR DGLDIHAMTA SEMFGVPVTG MPGEIRRRAK
AINFGIIYGI SAFGLANQLG IPREEAGTYI KKYFERFPGI RAYMDATRDF CREHGYVETL
FGRKCHYPDI KSPNPSHRAF NERAAINARL QGTAADIIRR AMVRMDDALA AKKLSARMLL
QVHDELIFEV PDDEVAATLP VVQHVMQDAP FPAMLLSVPL QVDARAADNW DEAH
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