Gene Nham_0355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0355 
Symbol 
ID4030452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp389203 
End bp389907 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content64% 
IMG OID637968889 
ProductABC transporter related 
Protein accessionYP_575711 
Protein GI92115982 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGATA TCAGGAATCT TCGCGCCTGG TACGGTCAGG TGCAGGCGCT GCGCGGTCTC 
GAATTCCATC TCAGCGAAGG CAGCATGACG GCGCTGCTCG GCGCCAACGG CGCCGGCAAG
ACCACCACGC TGCGCGCGAT CTGCAACATG GTGCGCACCA CAGGAACGAT CACGTTCGAA
GGCAAGCCGC TCGAAGGCCT ATCGACCGAA AGCATCGCCC GCCTCGGCAT CGCGCATGTG
CCGCAGGGAC GCGGCATCTT CACCACTATG ACGGTCGAGG AGAATCTGCA ACTCGGCGCG
ATCTCGCGAT CCGACAAGCC CGGTATCATC AGCGACATCG AGCGGATGTA CGGCCACTTC
CCGGTCCTCA AAGAGCGCCA CAGGCAACAG GCGGGAACGC TGTCGGGCGG CGAGCAGCAG
ATGCTTGCGG TCGCGCGCGC GCTGATGCTG CGACCACGGC TGATACTGCT CGACGAACCG
TCGTTCGGCC TCGCCCCGCT GATCGTGCGC GATGTGTTCA GGATACTCGG CAAGATCAAC
CGCGAGGACA AGGTCACCAT CCTCGTGGTC GAGCAGAACG CGCAGCTCGC GCTGAAACTC
GCCGATACCG CCTACGTCAT CGAGACCGGA CGGATCGTCA TGTCCGGCAG CGCCGCCGAC
ATCGCGAACA ACGAAGGCGT GCGCAGATCC TACCTGGGAT ACTAG
 
Protein sequence
MLDIRNLRAW YGQVQALRGL EFHLSEGSMT ALLGANGAGK TTTLRAICNM VRTTGTITFE 
GKPLEGLSTE SIARLGIAHV PQGRGIFTTM TVEENLQLGA ISRSDKPGII SDIERMYGHF
PVLKERHRQQ AGTLSGGEQQ MLAVARALML RPRLILLDEP SFGLAPLIVR DVFRILGKIN
REDKVTILVV EQNAQLALKL ADTAYVIETG RIVMSGSAAD IANNEGVRRS YLGY