Gene Ndas_5560 details

Gene Information

• Locus tag: Ndas_5560
• ID: 9249463
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111
• Kingdom: Bacteria
• Replicon accession: NC_014211
• Strand: -
• Start bp: 756263
• End bp: 758266
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 76%
• Product: Beta-galactosidase
• Protein accession: YP_003683445
• Protein GI: 297564472

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.3655
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCCTCTC CGCTGTGGTT CGGCGGCGAC TACAACCCCG AGCAGTGGCC GGAGGAGGTC 
CAGGCGGAGG ACGTGGAGCT GATGCGCCGC GCCGGGGTCA ACCTCGTGAC GGTCGGCGTC 
TTCTCCTGGG CGCTCCTGGA GCCGAAGGAG GGCGAGTACC GGTTCGAGTG GCTGGACCGG 
GTGCTGGACC GGCTCGCCGA CGCCGGGATC GGGGTCGCGC TGGCCACCCC GACCGCCTCT 
CCCCCGCCGT GGTTCGGGCT CGCCCACCCC GACGCGATGC CGGTGACCGC GGACGGGACC 
CGGCTCACCC ATGGCAGCCG CGACACCTAC GACGTGTGCT CCCCCGCCTA CCGGGAGGCC 
TCGGTGCGCA TCGCCCGCGC GCTGGCGGAG CGCTACTCCG GGCACCCGGC GCTGCGCCTG 
TGGCACGTGC ACAACGAGTA CGGGACGTGG TCGCACTCCG AGCACACCGC CGGGGCCTTC 
CGCGACTGGC TGCGGGGTCG CCACGTGGAC CTGGACCGGC TCAACGCGGC GTGGACCACG 
GCGTTCTGGA GCCAGCACTA CTCGGAGTGG GAGCAGATCC AGCCGCCGCG GGCGACCCAG 
TACCTGCCCA ACCCGGCGCA CGTGCTGGAC TTCCGGCGGT TCCTGTCGGA CGCGATGCTC 
GACCACTTCC TGTCCCAGCG CGACGTGCTG CGCGCCGTCC GGCCGGACGT GCCGGTCACG 
ACCAACCTGG CCTTCGGCGA CTGGGTGCCG GTGGACCCGT GGCGGTGGGC CGAGCACCTG 
GACCTGGTGG CCGTGGACGA CTACCCGGAC CGGACGGGGC AGGGCGGGGC GGAGCAGACC 
GCCTTCGCCG CCGATCTGGC CCGCTCGTGG GCGGAGCGCG TGCCCGGCCC GGGTCGGCCG 
TGGCTGTTGA TGGAACAGGC GGCGGGTGTG ACCTACACGG GCGAGGTCAC CCGGCCGAAG 
GCCCCCGGGG AGACGGCGCG GCACAGCCTG GCGCACGTGG CGCGCGGGTC GCGGGGCGCG 
ATGTTCTTCC AGTGGCGGGC GTCCCGGGGC GGCGCCGAGC AGTGGCACTC GGGGATGGTG 
CCGCACGCCG GGCCGGATTC GCGGATCTTC CGCGAGGTGT GCGAACTGGG GAGCGTGCTG 
CCCCGCGTGG CGGAGGCGCG CGACGCCGAC GTGGTCGCCG ACGCGGCGCT CACCTGGGAC 
CCCGAGTGCT GGTGGGCGCT GGGCAGCCCG TCGCTGCCGG CGCGGGGCGT GGACTACCTG 
GAGGCGGCGC GTCAGGTGCA CCGGGTGCTG TGGCGGTCGG GGCGCACGGT GGACATGGTG 
CGCCCCGACC GCGACCTGCC GCGGGTGCCG CTGCTGGTGG TGCCCGCCCT GTACCTGCTC 
TCGGACGAGG CGGCCGAGCG GTTGGCCCGC TACACCGAGG ACGGCGGAAC GCTGGTGGTG 
ACCTTCCTGA GCGGGGCCGC CGACCCGGAC GGGACCGTGC GCACCGGCGG GTACCCGGGC 
GCGCTGCGGG ACCTGCTGGG GGTGCGGGTG GAGGAGGTGC ACCCGCTGCT GCCCGGGGAC 
GCGGTGGGCG TGGACCTGGG TTCGGTGCGC GAGGAGGTCA CCCTGTGGAG CGAGCACGTC 
CACCTGGCGG GGGCCGAGGC GGTGGCCCAC TACGCGGGCG GCCCGCTGGA CGGGCTGCCC 
GCGGTGACGC GGCGGCGCCA CGGCGCGGGC GAGGCCTGGT ACCTGTCGGC CCGGCTGTCG 
GACCGGGGCC TGGCGCGGCT GCTGGCCGAG GCGGCGGGGA CGGGGCCGTT CCCGGAGCCG 
GGGCTGGAGG TGGTGCGCCG GGTGGACCGG GACGGCGCGT GGGTGTTCGT CACCAACCAC 
GACAACCGGC CGCGGTGGAT CGACCCGGCC CGGTTCGGGC TGGACGCGGG CGCCCGCGAC 
CTGGTGTCGG GCGTTTCGGC GCAGGGGATG ACCCTGCCGG GCGGCGGGGT GGCGGTGTTG 
CGCGGCCACC CCGTTGACAA TTAG 

 

Protein sequence

MSSPLWFGGD YNPEQWPEEV QAEDVELMRR AGVNLVTVGV FSWALLEPKE GEYRFEWLDR 
VLDRLADAGI GVALATPTAS PPPWFGLAHP DAMPVTADGT RLTHGSRDTY DVCSPAYREA 
SVRIARALAE RYSGHPALRL WHVHNEYGTW SHSEHTAGAF RDWLRGRHVD LDRLNAAWTT 
AFWSQHYSEW EQIQPPRATQ YLPNPAHVLD FRRFLSDAML DHFLSQRDVL RAVRPDVPVT 
TNLAFGDWVP VDPWRWAEHL DLVAVDDYPD RTGQGGAEQT AFAADLARSW AERVPGPGRP 
WLLMEQAAGV TYTGEVTRPK APGETARHSL AHVARGSRGA MFFQWRASRG GAEQWHSGMV 
PHAGPDSRIF REVCELGSVL PRVAEARDAD VVADAALTWD PECWWALGSP SLPARGVDYL 
EAARQVHRVL WRSGRTVDMV RPDRDLPRVP LLVVPALYLL SDEAAERLAR YTEDGGTLVV 
TFLSGAADPD GTVRTGGYPG ALRDLLGVRV EEVHPLLPGD AVGVDLGSVR EEVTLWSEHV 
HLAGAEAVAH YAGGPLDGLP AVTRRRHGAG EAWYLSARLS DRGLARLLAE AAGTGPFPEP 
GLEVVRRVDR DGAWVFVTNH DNRPRWIDPA RFGLDAGARD LVSGVSAQGM TLPGGGVAVL 
RGHPVDN