Gene Ndas_5390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5390 
Symbol 
ID9249293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp569658 
End bp570389 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003683275 
Protein GI297564302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAGC GCTCGGAACG GTCGGAGGGA CCGCTCCGGG TCCTGCTAGT GGAGCCCGAG 
TCGGAGCAGT CGCACCAGCT GGTGCTGTCG CTGAGCGGGC ACGACGTGGA CATCACGGTG
TGCGTGGACG GCGCCGAGGC GCTGCTGCGG GTGGGGATGA TGCGACCGGA CACCCTGGTG
ACCAGCGCCA CTCCGCCCGA GGTGGACCTG GAGACGCTGG TGCGGGTGAC CCGGCGGGCG
ACGGACATCC CGATCCTCAT CGGGGTGGGC CCCGGCGACT CCCAGCGGGC GATGCGCGCG
CTGGCGGCCG GAGCCACCGC GTGCGTCAAC CGCCCCTACC GGATCCCGGA GCTGGCGGCG
CTGCTGCGCG GCTCCCTCCC GGGACCGGAC GGCGGCGGCC CGGACGGCAC CGCCTCCTCG
GCCGCGCTGC GTTCGGGCGC CCTGGAGCTG GACGCGCTGG GGCACCGGCT CTTCGTGGAC
GGCAACCCGG TCAACCTGGC GCTGCGGGAG TTCGGGATCA TGGACTTCCT GCTGAGGCAC
AGCGGCAGGG TGGTCAGCCG CGAGGAGCTG TGGACCGAGG TCTGGCACAA GCCGCTGCCT
CCGGTGAACA ACACCATCGC CGTGCACATC CGGCGCCTGC GGCACAAGCT GGGTGACTCC
GAGGCACAGC CCAGGTTCAT CCACACGGTC CGGGGGATCG GCTACCGACT GGACACGGCG
AACGGTTCCT GA
 
Protein sequence
MVERSERSEG PLRVLLVEPE SEQSHQLVLS LSGHDVDITV CVDGAEALLR VGMMRPDTLV 
TSATPPEVDL ETLVRVTRRA TDIPILIGVG PGDSQRAMRA LAAGATACVN RPYRIPELAA
LLRGSLPGPD GGGPDGTASS AALRSGALEL DALGHRLFVD GNPVNLALRE FGIMDFLLRH
SGRVVSREEL WTEVWHKPLP PVNNTIAVHI RRLRHKLGDS EAQPRFIHTV RGIGYRLDTA
NGS