| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5326 |
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| Symbol | |
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| ID | 9249226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014211 |
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| Strand | - |
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| Start bp | 490414 |
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| End bp | 491124 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | |
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| Product | Type II secretion system F domain protein |
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| Protein accession | YP_003683212 |
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| Protein GI | 297564239 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00292685 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.534868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCTGA CGGTCGCCGC GGTTCTGGGA GCCGCGTGTG TGTGGGTACT GCTGGGCGGG
GGAACGGCGC GCGGACTGCG TCCGCCCTCC CGTGCTCCGG CCGGGCCGGG GCTGCCGGTC
CGCCTGCTGG GGCCGACCCT GGCGGGGGCG TTCGCGCTGA CCGTCGCGGT GGCCCTGTTC
GGCGCGGTCG GGGGCCTCGT CGTGGCCGGG GTGTGCGCCG CCCTGTGGGT GCGCGCCCGC
AGGAGCGCCG GTTCCCGTTC TCAACGGCTG CCGGTGACCG CCGACCTGCC CGTGGTGATC
GGTCTGCTCG CCTCGGGCAT CCGCGCCGGG GCGACGGTGC CCGCCTGCCT CACTGCGGTG
TCCCGGGCGA CGCGGGGAAG GCTGGGGGAG GAACTGGCCG CGGTGGCCGA ACAACTGCGC
CTGGGCGCCG CTCCCGCCGA GGCCTGGCGG CGCCCGGCGC TGCCCGAGCC CCTCGTCCCG
GTGGGGCGCG ACCTGGCCCG GGCCGCCGAC ACCGGGGCAC CGGTGGCCGA CCTCCTGGAC
CGGCACGCGG TCGATCTGCG CCGGACCCTG CGGGCCCGGG GGACGGCACG GCTGGAGCGG
CTGGGCGTGC TGGTGGTGGC GCCCCTGGGT CTGTGCTTCC TGCCCGCGTT CGTGCTGATC
GGCATCGTGC CGATGGCCGC CGAGCTGCTG TCCCGGGCCC TGGGCGGTTG A
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| Protein sequence | MFLTVAAVLG AACVWVLLGG GTARGLRPPS RAPAGPGLPV RLLGPTLAGA FALTVAVALF
GAVGGLVVAG VCAALWVRAR RSAGSRSQRL PVTADLPVVI GLLASGIRAG ATVPACLTAV
SRATRGRLGE ELAAVAEQLR LGAAPAEAWR RPALPEPLVP VGRDLARAAD TGAPVADLLD
RHAVDLRRTL RARGTARLER LGVLVVAPLG LCFLPAFVLI GIVPMAAELL SRALGG
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