Gene Ndas_5312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5312 
Symbol 
ID9249212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp478435 
End bp478896 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content74% 
IMG OID 
ProductEndoribonuclease L-PSP 
Protein accessionYP_003683198 
Protein GI297564225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.688432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCC CCGAGGAGCG GATCGCCGAG CTGGGTCTGA CCCTGCCCGA GGTGGCCGCG 
CCGGTCGCGT CGTACACGCC CGCGGTGCGC AGCGGCGACC ACGTCTACGT GTCCGGCCAG 
CTGCCGTTCG TGGACGGGAA GCTCCCCACT ACGGGCAAGG TCGGCGCCGA GGTCACCCCG 
GAGACGGCCA AGGAGCTGGC CGCGCGGTGC GCGCTGAACG CGGTGGCCGC GGTGCGCGCC 
GAGATCGGCG AGCTGTCCGG CGTGGTCCGC GTGGTCAAGG TGGGCGGCTT CGTGGCCAGC 
ACCCCCGACT TCACGGGACA GCCCGGCGTG GTGAACGGGG CCAGCGACCT GCTGGCCGAG 
ATCTTCGGCG CCGCCGGTGT GCACGCGCGC GCCGCCGTGG GCGTGGCCGC CCTGCCGTTG 
GACGCGCCGG TCGAGGTTGA GATGATCGTC GAGGTCCGCT GA
 
Protein sequence
MATPEERIAE LGLTLPEVAA PVASYTPAVR SGDHVYVSGQ LPFVDGKLPT TGKVGAEVTP 
ETAKELAARC ALNAVAAVRA EIGELSGVVR VVKVGGFVAS TPDFTGQPGV VNGASDLLAE 
IFGAAGVHAR AAVGVAALPL DAPVEVEMIV EVR